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Aliases for RPSAP44 Gene

Aliases for RPSAP44 Gene

  • Ribosomal Protein SA Pseudogene 44 2 3 5
  • RPSA_16_706 3

External Ids for RPSAP44 Gene

Previous GeneCards Identifiers for RPSAP44 Gene

  • GC06P054596
  • GC06P054492

Summaries for RPSAP44 Gene

GeneCards Summary for RPSAP44 Gene

RPSAP44 (Ribosomal Protein SA Pseudogene 44) is a Pseudogene.

Additional gene information for RPSAP44 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP44 Gene

Genomics for RPSAP44 Gene

GeneHancer (GH) Regulatory Elements for RPSAP44 Gene

Promoters and enhancers for RPSAP44 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I054617 Enhancer 0.6 Ensembl ENCODE 0.4 -6.7 -6667 1 JUND FOS RPSAP44 PIR43284
GH06I054717 Enhancer 0.7 ENCODE 0.2 +94.2 94183 1.6 CTCF PKNOX1 FEZF1 RAD21 ZEB1 TEAD3 ZNF366 ZBTB48 SMC3 PRDM10 ENSG00000224984 RNU6-1023P ENSG00000261116 GC06P054771 RPSAP44
GH06I054698 Enhancer 0.7 ENCODE 0.2 +74.8 74761 1.6 SMARCE1 PKNOX1 NR2F1 NEUROD1 DPF2 RELA ZNF217 CTBP1 GATA3 IKZF1 HCRTR2 ENSG00000224984 ENSG00000261116 GC06P054771 RPSAP44
GH06I054614 Enhancer 0.2 ENCODE 0.4 -9.6 -9649 0.2 PIR43284 RPSAP44
GH06I054722 Enhancer 0.2 ENCODE 0.2 +97.9 97944 0.8 ENSG00000261116 ENSG00000224984 GC06P054771 RPSAP44
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP44 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP44 Gene

Genomic Locations for RPSAP44 Gene
chr6:54,624,527-54,625,523
(GRCh38/hg38)
Size:
997 bases
Orientation:
Plus strand
chr6:54,489,325-54,490,321
(GRCh37/hg19)

Genomic View for RPSAP44 Gene

Genes around RPSAP44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP44 Gene

Proteins for RPSAP44 Gene

Post-translational modifications for RPSAP44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP44 Gene

Domains & Families for RPSAP44 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP44 Gene

Function for RPSAP44 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP44 Gene

Localization for RPSAP44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP44 Gene

Pathways & Interactions for RPSAP44 Gene

SuperPathways for RPSAP44 Gene

No Data Available

Interacting Proteins for RPSAP44 Gene

Gene Ontology (GO) - Biological Process for RPSAP44 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP44 Gene

Drugs & Compounds for RPSAP44 Gene

No Compound Related Data Available

Transcripts for RPSAP44 Gene

mRNA/cDNA for RPSAP44 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP44 Gene

No ASD Table

Relevant External Links for RPSAP44 Gene

GeneLoc Exon Structure for
RPSAP44
ECgene alternative splicing isoforms for
RPSAP44

Expression for RPSAP44 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP44 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP44 Gene

This gene is overexpressed in Muscle - Skeletal (x17.4), Nerve - Tibial (x4.8), and Brain - Nucleus accumbens (basal ganglia) (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP44 Gene:

RPSAP44
genes like me logo Genes that share expression patterns with RPSAP44: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP44 Gene

Orthologs for RPSAP44 Gene

Evolution for RPSAP44 Gene

ENSEMBL:
Gene Tree for RPSAP44 (if available)
TreeFam:
Gene Tree for RPSAP44 (if available)

No data available for Orthologs for RPSAP44 Gene

Paralogs for RPSAP44 Gene

No data available for Paralogs for RPSAP44 Gene

Variants for RPSAP44 Gene

Additional Variant Information for RPSAP44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP44 Gene

Disorders for RPSAP44 Gene

Additional Disease Information for RPSAP44

Genetic Association Database
(GAD)

No disorders were found for RPSAP44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP44 Gene

Publications for RPSAP44 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 44 58

Products for RPSAP44 Gene

Sources for RPSAP44 Gene

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