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Aliases for RPSAP40 Gene

Aliases for RPSAP40 Gene

  • Ribosomal Protein SA Pseudogene 40 2 3 5
  • RPSA_13_766 3

External Ids for RPSAP40 Gene

Previous GeneCards Identifiers for RPSAP40 Gene

  • GC06U901599
  • GC06M148969

Summaries for RPSAP40 Gene

GeneCards Summary for RPSAP40 Gene

RPSAP40 (Ribosomal Protein SA Pseudogene 40) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP40 Gene

Genomics for RPSAP40 Gene

Regulatory Elements for RPSAP40 Gene

Enhancers for RPSAP40 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F148649 0.4 Ensembl 0.8 -0.6 -630 1.0 CTBP1 ZNF133 BHLHE40 FOS ZIC2 SPI1 UST-AS1 RPSAP40 GC06P148683
GH06F148656 1.2 FANTOM5 Ensembl ENCODE 0.4 -8.5 -8530 1.2 JUND ZNF146 CEBPB FOS EP300 SPI1 SASH1 RPSAP40 GC06P148683
GH06F148677 1.1 Ensembl ENCODE 0.3 -29.6 -29647 1.6 PKNOX1 TBL1XR1 BMI1 EBF1 RELA CBX5 ZNF207 FOS CREM MTA2 GC06P148683 RPSAP40
GH06F148675 0.3 FANTOM5 0.3 -27.3 -27291 0.2 SASH1 GC06P148683 RPSAP40
GH06F148682 1 Ensembl ENCODE 0.3 -34.2 -34240 1.4 GATAD2A MLX TEAD1 NR2F1 MNT TEAD3 RARA RAD51 IKZF1 SPI1 UST-AS1 GC06P148683 RPSAP40
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPSAP40 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP40 Gene

148,647,624 bp from pter
148,648,671 bp from pter
1,048 bases
Minus strand

Genomic View for RPSAP40 Gene

Genes around RPSAP40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP40 Gene

Proteins for RPSAP40 Gene

Post-translational modifications for RPSAP40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP40 Gene

Domains & Families for RPSAP40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP40 Gene

Function for RPSAP40 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP40 Gene

Localization for RPSAP40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP40 Gene

Pathways & Interactions for RPSAP40 Gene

SuperPathways for RPSAP40 Gene

No Data Available

Interacting Proteins for RPSAP40 Gene

Gene Ontology (GO) - Biological Process for RPSAP40 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP40 Gene

Transcripts for RPSAP40 Gene

mRNA/cDNA for RPSAP40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP40 Gene

No ASD Table

Relevant External Links for RPSAP40 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP40 Gene

mRNA expression in normal human tissues for RPSAP40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP40 Gene:

genes like me logo Genes that share expression patterns with RPSAP40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPSAP40 Gene

Orthologs for RPSAP40 Gene

Evolution for RPSAP40 Gene

Gene Tree for RPSAP40 (if available)
Gene Tree for RPSAP40 (if available)

No data available for Orthologs for RPSAP40 Gene

Paralogs for RPSAP40 Gene

No data available for Paralogs for RPSAP40 Gene

Variants for RPSAP40 Gene

Relevant External Links for RPSAP40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP40 Gene

Disorders for RPSAP40 Gene

Relevant External Links for RPSAP40

Genetic Association Database (GAD)

No disorders were found for RPSAP40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP40 Gene

Publications for RPSAP40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPSAP40 Gene

Sources for RPSAP40 Gene

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