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Aliases for RPSAP40 Gene

Aliases for RPSAP40 Gene

  • Ribosomal Protein SA Pseudogene 40 2 3 5
  • RPSA_13_766 3

External Ids for RPSAP40 Gene

Previous GeneCards Identifiers for RPSAP40 Gene

  • GC06U901599
  • GC06M148969

Summaries for RPSAP40 Gene

GeneCards Summary for RPSAP40 Gene

RPSAP40 (Ribosomal Protein SA Pseudogene 40) is a Pseudogene.

Additional gene information for RPSAP40 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP40 Gene

Genomics for RPSAP40 Gene

Regulatory Elements for RPSAP40 Gene

Enhancers for RPSAP40 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H148656 1.1 FANTOM5 Ensembl ENCODE 0.4 -8.5 -8522 1.2 JUND CEBPB FOS EP300 SPI1 SASH1 RPSAP40 GC06P148683
GH06H148648 0.4 Ensembl 0.7 -0.6 -630 1 SPI1 UST-AS1 RPSAP40 GC06P148683
GH06H148677 0.8 ENCODE 0.3 -29.6 -29647 1.6 PKNOX1 TBL1XR1 BACH1 BMI1 EBF1 BATF RELA EED ZNF207 ATF7 GC06P148683 RPSAP40
GH06H148682 0.8 Ensembl ENCODE 0.3 -34.6 -34561 0.8 POLR2A IKZF1 IKZF2 SPI1 UST-AS1 GC06P148683 RPSAP40
GH06H148675 0.3 FANTOM5 0.3 -27.3 -27291 0.2 SASH1 GC06P148683 RPSAP40
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP40 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP40 Gene

Genomic Locations for RPSAP40 Gene
1,048 bases
Minus strand

Genomic View for RPSAP40 Gene

Genes around RPSAP40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP40 Gene

Proteins for RPSAP40 Gene

Post-translational modifications for RPSAP40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP40 Gene

Domains & Families for RPSAP40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP40 Gene

Function for RPSAP40 Gene

Phenotypes From GWAS Catalog for RPSAP40 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP40 Gene

Localization for RPSAP40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP40 Gene

Pathways & Interactions for RPSAP40 Gene

SuperPathways for RPSAP40 Gene

No Data Available

Interacting Proteins for RPSAP40 Gene

Gene Ontology (GO) - Biological Process for RPSAP40 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP40 Gene

Drugs & Compounds for RPSAP40 Gene

No Compound Related Data Available

Transcripts for RPSAP40 Gene

mRNA/cDNA for RPSAP40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP40 Gene

No ASD Table

Relevant External Links for RPSAP40 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP40 Gene:

genes like me logo Genes that share expression patterns with RPSAP40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP40 Gene

Orthologs for RPSAP40 Gene

Evolution for RPSAP40 Gene

Gene Tree for RPSAP40 (if available)
Gene Tree for RPSAP40 (if available)

No data available for Orthologs for RPSAP40 Gene

Paralogs for RPSAP40 Gene

No data available for Paralogs for RPSAP40 Gene

Variants for RPSAP40 Gene

Relevant External Links for RPSAP40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP40 Gene

Disorders for RPSAP40 Gene

Relevant External Links for RPSAP40

Genetic Association Database (GAD)

No disorders were found for RPSAP40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP40 Gene

Publications for RPSAP40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPSAP40 Gene

Sources for RPSAP40 Gene

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