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Aliases for RPSAP4 Gene

Aliases for RPSAP4 Gene

  • Ribosomal Protein SA Pseudogene 4 2 3 5
  • Laminin Receptor 1 Pseudogene 4 2 3
  • RPSA_27_1403 3
  • LAMR1P4 3

External Ids for RPSAP4 Gene

Previous HGNC Symbols for RPSAP4 Gene

  • LAMR1P4

Previous GeneCards Identifiers for RPSAP4 Gene

  • GC14P094263
  • GC14P095193

Summaries for RPSAP4 Gene

GeneCards Summary for RPSAP4 Gene

RPSAP4 (Ribosomal Protein SA Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP4 Gene

Genomics for RPSAP4 Gene

Regulatory Elements for RPSAP4 Gene

Enhancers for RPSAP4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G093953 2 FANTOM5 Ensembl ENCODE dbSUPER 7.1 -766.2 -766212 13.2 HDGF PKNOX1 FOXA2 MLX WRNIP1 ZFP64 SIN3A ARID4B FEZF1 DMAP1 SERPINA1 C14orf48 UBR7 IFI27L2 IFI27 RPSAP4 FAM181A-AS1 ASB2 DDX24 MIR4506
GH14G094768 1.2 Ensembl ENCODE 0.3 +43.3 43316 2.4 SIN3A ZNF76 YY1 GLIS2 ZNF263 ZNF202 SP3 HCFC1 ZHX2 CEBPB GSC RPSAP4
GH14G094681 0.9 ENCODE 0.3 -44.7 -44684 0.2 ATF1 RAD21 RARA ELK1 ZNF143 FOS RCOR1 CREM MIXL1 THAP11 LOC100288028 RPSAP4
GH14G094689 0.9 Ensembl 0.3 -36.3 -36272 1.1 ELF3 RB1 SIN3A ZBTB40 ZNF2 ZNF48 RAD21 ZNF335 GLIS2 ZNF143 GSC LOC100288028 RPSAP4
GH14G094748 0.8 ENCODE 0.3 +22.8 22767 0.2 CTCF PKNOX1 ZNF2 RAD21 HIC1 GATA3 SCRT2 SMC3 ZNF143 RELB GSC RPSAP4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP4 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP4 Gene

Chromosome:
14
Start:
94,726,212 bp from pter
End:
94,727,245 bp from pter
Size:
1,034 bases
Orientation:
Plus strand

Genomic View for RPSAP4 Gene

Genes around RPSAP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP4 Gene

Proteins for RPSAP4 Gene

Post-translational modifications for RPSAP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP4 Gene

Domains & Families for RPSAP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP4 Gene

Function for RPSAP4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP4 Gene

Localization for RPSAP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP4 Gene

Pathways & Interactions for RPSAP4 Gene

SuperPathways for RPSAP4 Gene

No Data Available

Interacting Proteins for RPSAP4 Gene

Gene Ontology (GO) - Biological Process for RPSAP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP4 Gene

Drugs & Compounds for RPSAP4 Gene

No Compound Related Data Available

Transcripts for RPSAP4 Gene

mRNA/cDNA for RPSAP4 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP4 Gene

No ASD Table

Relevant External Links for RPSAP4 Gene

GeneLoc Exon Structure for
RPSAP4
ECgene alternative splicing isoforms for
RPSAP4

Expression for RPSAP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP4 Gene:

RPSAP4
genes like me logo Genes that share expression patterns with RPSAP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP4 Gene

Orthologs for RPSAP4 Gene

Evolution for RPSAP4 Gene

ENSEMBL:
Gene Tree for RPSAP4 (if available)
TreeFam:
Gene Tree for RPSAP4 (if available)

No data available for Orthologs for RPSAP4 Gene

Paralogs for RPSAP4 Gene

No data available for Paralogs for RPSAP4 Gene

Variants for RPSAP4 Gene

Relevant External Links for RPSAP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP4 Gene

Disorders for RPSAP4 Gene

No disorders were found for RPSAP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP4 Gene

Publications for RPSAP4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1. (PMID: 15014966) Namciu S.J. … Fournier R.E. (Mamm. Genome 2004) 3 64

Products for RPSAP4 Gene

Sources for RPSAP4 Gene

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