Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPSAP35 Gene

Subcategory (RNA class) for RPSAP35 Gene

lncRNA

Aliases for RPSAP35 Gene

  • Ribosomal Protein SA Pseudogene 35 2 3 5
  • RPSA_13_513 3

External Ids for RPSAP35 Gene

ORGUL Members for RPSAP35 Gene

Previous GeneCards Identifiers for RPSAP35 Gene

  • GC04U901004
  • GC04P118335

Summaries for RPSAP35 Gene

GeneCards Summary for RPSAP35 Gene

RPSAP35 (Ribosomal Protein SA Pseudogene 35) is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for RPSAP35 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPSAP35 Gene

Genomics for RPSAP35 Gene

Regulatory Elements for RPSAP35 Gene

Enhancers for RPSAP35 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RPSAP35 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP35 Gene

Chromosome:
4
Start:
117,413,462 bp from pter
End:
117,414,281 bp from pter
Size:
820 bases
Orientation:
Plus strand

Genomic View for RPSAP35 Gene

Genes around RPSAP35 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP35 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP35 Gene

ORGUL Member Location for RPSAP35 Gene

ORGUL Member Location for RPSAP35 gene

Proteins for RPSAP35 Gene

Post-translational modifications for RPSAP35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP35 Gene

Domains & Families for RPSAP35 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP35 Gene

Function for RPSAP35 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP35 Gene

Localization for RPSAP35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP35 Gene

Pathways & Interactions for RPSAP35 Gene

SuperPathways for RPSAP35 Gene

No Data Available

Interacting Proteins for RPSAP35 Gene

Gene Ontology (GO) - Biological Process for RPSAP35 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP35 Gene

Drugs & Compounds for RPSAP35 Gene

No Compound Related Data Available

Transcripts for RPSAP35 Gene

mRNA/cDNA for RPSAP35 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP35 Gene

No ASD Table

Relevant External Links for RPSAP35 Gene

GeneLoc Exon Structure for
RPSAP35
ECgene alternative splicing isoforms for
RPSAP35

Expression for RPSAP35 Gene

mRNA expression in normal human tissues for RPSAP35 Gene

genes like me logo Genes that share expression patterns with RPSAP35: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RPSAP35 Gene

Orthologs for RPSAP35 Gene

Evolution for RPSAP35 Gene

ENSEMBL:
Gene Tree for RPSAP35 (if available)
TreeFam:
Gene Tree for RPSAP35 (if available)

No data available for Orthologs for RPSAP35 Gene

Paralogs for RPSAP35 Gene

No data available for Paralogs for RPSAP35 Gene

Variants for RPSAP35 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for RPSAP35 Gene

Disorders for RPSAP35 Gene

Relevant External Links for RPSAP35

Genetic Association Database (GAD)
RPSAP35

No disorders were found for RPSAP35 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP35 Gene

Publications for RPSAP35 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang K.C. … Mattick J.S. (Nucleic Acids Res. 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S. … Stadler P.F. (Nat. Biotechnol. 2005) 1

Products for RPSAP35 Gene

Sources for RPSAP35 Gene

Content