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Aliases for RPSAP33 Gene

Subcategory (RNA class) for RPSAP33 Gene

lncRNA

Aliases for RPSAP33 Gene

  • Ribosomal Protein SA Pseudogene 33 2 3 5
  • RPSA_10_433 3

External Ids for RPSAP33 Gene

ORGUL Members for RPSAP33 Gene

Previous GeneCards Identifiers for RPSAP33 Gene

  • GC03P169868
  • GC03P168385

Summaries for RPSAP33 Gene

GeneCards Summary for RPSAP33 Gene

RPSAP33 (Ribosomal Protein SA Pseudogene 33) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPSAP33 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP33 Gene

Genomics for RPSAP33 Gene

Regulatory Elements for RPSAP33 Gene

Enhancers for RPSAP33 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H168839 0.7 ENCODE dbSUPER 0.1 +173.7 173741 1 POU5F1 MAFK EGFEM1P GC03M168859 RPSAP33
GH03H168846 0.7 dbSUPER 0.1 +180.9 180922 0 CTCF ZNF654 PKNOX1 ZNF362 TRIM22 MAX MNT RAD21 ZNF316 MAFF EGFEM1P RNU2-20P GC03M168859 RPSAP33
GH03H168731 0.3 FANTOM5 0.2 +64.9 64920 0 EGFEM1P RPSAP33 GC03M168859
GH03H168812 0.6 ENCODE 0.1 +146.0 146000 0 PKNOX1 ZNF362 POU5F1 PRDM1 ATF2 EZH2 GC03M168859 RPSAP33
GH03H168827 0.4 dbSUPER 0.1 +161.9 161887 1 POLR2A EGFEM1P RNU2-20P GC03M168859 RPSAP33
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP33 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP33 Gene

Chromosome:
3
Start:
168,666,484 bp from pter
End:
168,667,423 bp from pter
Size:
940 bases
Orientation:
Plus strand

Genomic View for RPSAP33 Gene

Genes around RPSAP33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP33 Gene

Proteins for RPSAP33 Gene

Post-translational modifications for RPSAP33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP33 Gene

Domains & Families for RPSAP33 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP33 Gene

Function for RPSAP33 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPSAP33
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP33 Gene

Localization for RPSAP33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP33 Gene

Pathways & Interactions for RPSAP33 Gene

SuperPathways for RPSAP33 Gene

No Data Available

Interacting Proteins for RPSAP33 Gene

Gene Ontology (GO) - Biological Process for RPSAP33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP33 Gene

Drugs & Compounds for RPSAP33 Gene

No Compound Related Data Available

Transcripts for RPSAP33 Gene

mRNA/cDNA for RPSAP33 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPSAP33
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP33 Gene

No ASD Table

Relevant External Links for RPSAP33 Gene

GeneLoc Exon Structure for
RPSAP33
ECgene alternative splicing isoforms for
RPSAP33

Expression for RPSAP33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP33 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP33 Gene:

RPSAP33
genes like me logo Genes that share expression patterns with RPSAP33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP33 Gene

Orthologs for RPSAP33 Gene

Evolution for RPSAP33 Gene

ENSEMBL:
Gene Tree for RPSAP33 (if available)
TreeFam:
Gene Tree for RPSAP33 (if available)

No data available for Orthologs for RPSAP33 Gene

Paralogs for RPSAP33 Gene

No data available for Paralogs for RPSAP33 Gene

Variants for RPSAP33 Gene

Relevant External Links for RPSAP33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP33 Gene

Disorders for RPSAP33 Gene

No disorders were found for RPSAP33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP33 Gene

Publications for RPSAP33 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPSAP33 Gene

Sources for RPSAP33 Gene

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