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Aliases for RPSAP28 Gene

Aliases for RPSAP28 Gene

  • Ribosomal Protein SA Pseudogene 28 2 3 5
  • RPSA_4_242 3

External Ids for RPSAP28 Gene

Previous GeneCards Identifiers for RPSAP28 Gene

  • GC02P073452
  • GC02P073598

Summaries for RPSAP28 Gene

GeneCards Summary for RPSAP28 Gene

RPSAP28 (Ribosomal Protein SA Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP28 Gene

Genomics for RPSAP28 Gene

Regulatory Elements for RPSAP28 Gene

Enhancers for RPSAP28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F073968 1.4 Ensembl ENCODE 16.2 +601.1 601050 5.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 SEMA4F C2orf81 LOC107985899 KRT18P26 RPSAP28 SMYD5 DGUOK-AS1 DCTN1 DGUOK WBP1
GH02F074196 0.2 ENCODE 16.2 +828.8 828797 3.9 HDGF PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 ENSG00000273245 DUSP11 DGUOK-AS1 PCGF1 SEMA4F BOLA3-AS1 C2orf81 SLC4A5 MOGS KRT18P26
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPSAP28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP28 Gene

Chromosome:
2
Start:
73,369,951 bp from pter
End:
73,370,963 bp from pter
Size:
1,013 bases
Orientation:
Plus strand

Genomic View for RPSAP28 Gene

Genes around RPSAP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP28 Gene

Proteins for RPSAP28 Gene

Post-translational modifications for RPSAP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP28 Gene

Domains & Families for RPSAP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP28 Gene

Function for RPSAP28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP28 Gene

Localization for RPSAP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP28 Gene

Pathways & Interactions for RPSAP28 Gene

SuperPathways for RPSAP28 Gene

No Data Available

Interacting Proteins for RPSAP28 Gene

Gene Ontology (GO) - Biological Process for RPSAP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP28 Gene

Transcripts for RPSAP28 Gene

mRNA/cDNA for RPSAP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP28 Gene

No ASD Table

Relevant External Links for RPSAP28 Gene

GeneLoc Exon Structure for
RPSAP28
ECgene alternative splicing isoforms for
RPSAP28

Expression for RPSAP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP28 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP28 Gene

This gene is overexpressed in Testis (x48.6).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP28 Gene:

RPSAP28
genes like me logo Genes that share expression patterns with RPSAP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPSAP28 Gene

Orthologs for RPSAP28 Gene

Evolution for RPSAP28 Gene

ENSEMBL:
Gene Tree for RPSAP28 (if available)
TreeFam:
Gene Tree for RPSAP28 (if available)

No data available for Orthologs for RPSAP28 Gene

Paralogs for RPSAP28 Gene

No data available for Paralogs for RPSAP28 Gene

Variants for RPSAP28 Gene

Relevant External Links for RPSAP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP28 Gene

Disorders for RPSAP28 Gene

No disorders were found for RPSAP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP28 Gene

Publications for RPSAP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPSAP28 Gene

Sources for RPSAP28 Gene

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