Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPSAP26 Gene

Aliases for RPSAP26 Gene

  • Ribosomal Protein SA Pseudogene 26 2 3 5
  • RPSA_3_227 3

External Ids for RPSAP26 Gene

Previous GeneCards Identifiers for RPSAP26 Gene

  • GC02P062221
  • GC02P062374
  • GC02P062148

Summaries for RPSAP26 Gene

GeneCards Summary for RPSAP26 Gene

RPSAP26 (Ribosomal Protein SA Pseudogene 26) is a Pseudogene.

Additional gene information for RPSAP26 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP26 Gene

Genomics for RPSAP26 Gene

GeneHancer (GH) Regulatory Elements for RPSAP26 Gene

Promoters and enhancers for RPSAP26 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I062145 Enhancer 0.7 ENCODE 550.8 -0.5 -516 0.2 SMAD1 BACH1 EBF1 RELA ATF7 IKZF2 TRIM22 DPF2 ELF1 ATF2 ENSG00000229839 RPSAP26 GC02P062147 FAM161A GC02P062003 COMMD1
GH02I062140 Enhancer 0.7 ENCODE 0.8 -4.9 -4892 2.5 PKNOX1 SMAD1 RB1 BACH1 PAX8 EBF1 YBX1 BATF IRF4 NFATC1 B3GNT2 FAM161A RPSAP26 ENSG00000229839 GC02P062003 COMMD1
GH02I062129 Enhancer 1 Ensembl ENCODE 0.4 -16.5 -16454 1.5 HDGF SMAD1 EBF1 BMI1 BATF IRF4 RELA POLR2A ATF7 ETV6 CCT4 COMMD1 FAM161A RPSAP26 ENSG00000229839 GC02P062003
GH02I062112 Enhancer 0.7 Ensembl ENCODE 0.3 -33.9 -33896 0.4 ZNF335 PKNOX1 ZNF362 PRDM6 ZNF341 ZNF600 RPSAP26 ENSG00000229839 GC02P062003 COMMD1
GH02I062102 Enhancer 0.5 ENCODE 0.3 -43.6 -43636 0.2 ZNF687 NR2F1 IKZF1 IKZF2 B3GNT2 RPSAP26 ENSG00000229839 GC02P062003 COMMD1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP26 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP26 Gene

Genomic Locations for RPSAP26 Gene
chr2:62,146,297-62,147,326
(GRCh38/hg38)
Size:
1,030 bases
Orientation:
Plus strand
chr2:62,373,432-62,374,461
(GRCh37/hg19)

Genomic View for RPSAP26 Gene

Genes around RPSAP26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP26 Gene

Proteins for RPSAP26 Gene

Post-translational modifications for RPSAP26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP26 Gene

Domains & Families for RPSAP26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP26 Gene

Function for RPSAP26 Gene

Phenotypes From GWAS Catalog for RPSAP26 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP26 Gene

Localization for RPSAP26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP26 Gene

Pathways & Interactions for RPSAP26 Gene

SuperPathways for RPSAP26 Gene

No Data Available

Interacting Proteins for RPSAP26 Gene

Gene Ontology (GO) - Biological Process for RPSAP26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP26 Gene

Drugs & Compounds for RPSAP26 Gene

No Compound Related Data Available

Transcripts for RPSAP26 Gene

mRNA/cDNA for RPSAP26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP26 Gene

No ASD Table

Relevant External Links for RPSAP26 Gene

GeneLoc Exon Structure for
RPSAP26
ECgene alternative splicing isoforms for
RPSAP26

Expression for RPSAP26 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP26 Gene:

RPSAP26
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP26 Gene

Orthologs for RPSAP26 Gene

Evolution for RPSAP26 Gene

ENSEMBL:
Gene Tree for RPSAP26 (if available)
TreeFam:
Gene Tree for RPSAP26 (if available)

No data available for Orthologs for RPSAP26 Gene

Paralogs for RPSAP26 Gene

No data available for Paralogs for RPSAP26 Gene

Variants for RPSAP26 Gene

Additional Variant Information for RPSAP26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP26 Gene

Disorders for RPSAP26 Gene

No disorders were found for RPSAP26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP26 Gene

Publications for RPSAP26 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for RPSAP26 Gene

Sources for RPSAP26 Gene

Content
Loading form....