Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPSAP21 Gene

Aliases for RPSAP21 Gene

  • Ribosomal Protein SA Pseudogene 21 2 3 5
  • RPSA_2_180 3

External Ids for RPSAP21 Gene

Previous GeneCards Identifiers for RPSAP21 Gene

  • GC01U902326
  • GC01P236983

Summaries for RPSAP21 Gene

GeneCards Summary for RPSAP21 Gene

RPSAP21 (Ribosomal Protein SA Pseudogene 21) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP21 Gene

Genomics for RPSAP21 Gene

Regulatory Elements for RPSAP21 Gene

Enhancers for RPSAP21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G237182 0.7 dbSUPER 4.6 +363.8 363810 2.2 TEAD4 MAFG ZNF394 ZNF781 ZNF518A ATF2 ZNF316 MAFF ZNF555 EMSY RPSAP21 RN7SKP195 GC01P237314
GH01G237153 0.6 dbSUPER 4.9 +335.0 335011 1.5 PKNOX1 ZNF223 EP300 ZNF121 ZNF324 ZNF629 ZNF350 ZNF524 PRDM1 ZBTB1 ENSG00000273058 ENSG00000230325 RYR2 RPSAP21 RN7SKP195 GC01P237314
GH01G237179 0.4 dbSUPER 4.6 +360.4 360420 1.2 ZNF140 MNT RPSAP21 RN7SKP195 GC01P237314
GH01G237135 0.2 dbSUPER 5.2 +316.8 316751 1.1 RPSAP21 RN7SKP195 GC01P237314
GH01G237173 0.2 dbSUPER 4.7 +353.9 353943 0.7 RPSAP21 RN7SKP195 GC01P237314
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP21 Gene

Chromosome:
1
Start:
236,819,556 bp from pter
End:
236,820,590 bp from pter
Size:
1,035 bases
Orientation:
Plus strand

Genomic View for RPSAP21 Gene

Genes around RPSAP21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP21 Gene

Proteins for RPSAP21 Gene

Post-translational modifications for RPSAP21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP21 Gene

Domains & Families for RPSAP21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP21 Gene

Function for RPSAP21 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP21 Gene

Localization for RPSAP21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP21 Gene

Pathways & Interactions for RPSAP21 Gene

SuperPathways for RPSAP21 Gene

No Data Available

Interacting Proteins for RPSAP21 Gene

Gene Ontology (GO) - Biological Process for RPSAP21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP21 Gene

Transcripts for RPSAP21 Gene

mRNA/cDNA for RPSAP21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP21 Gene

No ASD Table

Relevant External Links for RPSAP21 Gene

GeneLoc Exon Structure for
RPSAP21
ECgene alternative splicing isoforms for
RPSAP21

Expression for RPSAP21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP21 Gene:

RPSAP21
genes like me logo Genes that share expression patterns with RPSAP21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP21 Gene

Orthologs for RPSAP21 Gene

Evolution for RPSAP21 Gene

ENSEMBL:
Gene Tree for RPSAP21 (if available)
TreeFam:
Gene Tree for RPSAP21 (if available)

No data available for Orthologs for RPSAP21 Gene

Paralogs for RPSAP21 Gene

No data available for Paralogs for RPSAP21 Gene

Variants for RPSAP21 Gene

Relevant External Links for RPSAP21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP21 Gene

Disorders for RPSAP21 Gene

No disorders were found for RPSAP21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP21 Gene

Publications for RPSAP21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPSAP21 Gene

Sources for RPSAP21 Gene

Content
Loading form....