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Aliases for RPSAP20 Gene

Aliases for RPSAP20 Gene

  • Ribosomal Protein SA Pseudogene 20 2 3 5
  • RPSA_1_53 3

External Ids for RPSAP20 Gene

Previous GeneCards Identifiers for RPSAP20 Gene

  • GC01M056445
  • GC01M056674

Summaries for RPSAP20 Gene

GeneCards Summary for RPSAP20 Gene

RPSAP20 (Ribosomal Protein SA Pseudogene 20) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP20 Gene

Genomics for RPSAP20 Gene

Regulatory Elements for RPSAP20 Gene

Enhancers for RPSAP20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F056199 1.2 Ensembl ENCODE 0.4 +7.9 7856 2.7 CTCF PKNOX1 STAT1 OSR2 SMARCA4 GLIS1 FOXP2 SP7 TCF7L2 ENSG00000260971 RPSAP20 ENSG00000235612
GH01F056216 0.9 Ensembl ENCODE 0.4 -7.9 -7872 0.4 IKZF1 RPSAP20 GC01M056246
GH01F056215 0.9 FANTOM5 0.4 -6.7 -6658 0.3 RPSAP20 GC01M056246
GH01F056194 0.2 ENCODE 0.4 +13.7 13666 1.6 HLF CEBPB MAFK RPSAP20 ENSG00000235612
GH01F056195 0.7 ENCODE 0.4 +11.8 11795 1.5 CEBPA CEBPB RPSAP20 ENSG00000235612
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPSAP20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP20 Gene

56,207,472 bp from pter
56,208,529 bp from pter
1,058 bases
Minus strand

Genomic View for RPSAP20 Gene

Genes around RPSAP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP20 Gene

Proteins for RPSAP20 Gene

Post-translational modifications for RPSAP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP20 Gene

Domains & Families for RPSAP20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP20 Gene

Function for RPSAP20 Gene

genes like me logo Genes that share phenotypes with RPSAP20: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP20 Gene

Localization for RPSAP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP20 Gene

Pathways & Interactions for RPSAP20 Gene

SuperPathways for RPSAP20 Gene

No Data Available

Interacting Proteins for RPSAP20 Gene

Gene Ontology (GO) - Biological Process for RPSAP20 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP20 Gene

Transcripts for RPSAP20 Gene

mRNA/cDNA for RPSAP20 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP20 Gene

No ASD Table

Relevant External Links for RPSAP20 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP20 Gene:

genes like me logo Genes that share expression patterns with RPSAP20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPSAP20 Gene

Orthologs for RPSAP20 Gene

Evolution for RPSAP20 Gene

Gene Tree for RPSAP20 (if available)
Gene Tree for RPSAP20 (if available)

No data available for Orthologs for RPSAP20 Gene

Paralogs for RPSAP20 Gene

No data available for Paralogs for RPSAP20 Gene

Variants for RPSAP20 Gene

Relevant External Links for RPSAP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP20 Gene

Disorders for RPSAP20 Gene

Relevant External Links for RPSAP20

Genetic Association Database (GAD)

No disorders were found for RPSAP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP20 Gene

Publications for RPSAP20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association reveals genetic effects on human AI^42 and I8 protein levels in cerebrospinal fluids: a case control study. (PMID: 20932310) Han M.R. … Wang L.S. (BMC Neurol 2010) 46 64

Products for RPSAP20 Gene

Sources for RPSAP20 Gene

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