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RPSAP18 Gene(Pseudogene)

Ribosomal Protein SA Pseudogene 18

GCID:
GC01M160238
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPSAP18 Gene

Aliases for RPSAP18 Gene

  • Ribosomal Protein SA Pseudogene 18 2 3 5
  • RPSA_4_107 3

External Ids for RPSAP18 Gene

Previous GeneCards Identifiers for RPSAP18 Gene

  • GC01M158504
  • GC01M160237

Summaries for RPSAP18 Gene

GeneCards Summary for RPSAP18 Gene

RPSAP18 (Ribosomal Protein SA Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP18 Gene

Genomics for RPSAP18 Gene

Products:

  1. Regulatory Element

Regulatory Elements for RPSAP18 Gene

Enhancers for RPSAP18 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RPSAP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP18 Gene

Chromosome:
1
Start:
160,266,269 bp from pter
End:
160,267,303 bp from pter
Size:
1,035 bases
Orientation:
Minus strand

Genomic View for RPSAP18 Gene

Genes around RPSAP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP18 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPSAP18 Gene

Proteins for RPSAP18 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPSAP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP18 Gene

Domains & Families for RPSAP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP18 Gene

Function for RPSAP18 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP18 Gene

Localization for RPSAP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP18 Gene

Pathways & Interactions for RPSAP18 Gene

SuperPathways for RPSAP18 Gene

PathCards logoMore details on SuperPathways for RPSAP18
No Data Available

Interacting Proteins for RPSAP18 Gene

Gene Ontology (GO) - Biological Process for RPSAP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP18 Gene

Drugs & Compounds for RPSAP18 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPSAP18 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for RPSAP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP18 Gene

No ASD Table

Relevant External Links for RPSAP18 Gene

GeneLoc Exon Structure for
RPSAP18
ECgene alternative splicing isoforms for
RPSAP18

Expression for RPSAP18 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for RPSAP18 Gene

mRNA expression in normal human tissues for RPSAP18 Gene
mRNA expression by GTEx for RPSAP18 Gene
genes like me logo Genes that share expression patterns with RPSAP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RPSAP18 Gene

Orthologs for RPSAP18 Gene

Evolution for RPSAP18 Gene

ENSEMBL:
Gene Tree for RPSAP18 (if available)
TreeFam:
Gene Tree for RPSAP18 (if available)

No data available for Orthologs for RPSAP18 Gene

Paralogs for RPSAP18 Gene

No data available for Paralogs for RPSAP18 Gene

Variants for RPSAP18 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for RPSAP18 Gene

Disorders for RPSAP18 Gene

No disorders were found for RPSAP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP18 Gene

Publications for RPSAP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3

Products for RPSAP18 Gene

Sources for RPSAP18 Gene

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