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Aliases for RPSAP18 Gene

Aliases for RPSAP18 Gene

  • Ribosomal Protein SA Pseudogene 18 2 3 5
  • RPSA_4_107 3

External Ids for RPSAP18 Gene

Previous GeneCards Identifiers for RPSAP18 Gene

  • GC01M158504
  • GC01M160237

Summaries for RPSAP18 Gene

GeneCards Summary for RPSAP18 Gene

RPSAP18 (Ribosomal Protein SA Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP18 Gene

Genomics for RPSAP18 Gene

Regulatory Elements for RPSAP18 Gene

Enhancers for RPSAP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F161096 1.2 ENCODE 25.6 -830.4 -830376 2.9 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A FEZF1 YBX1 ZNF2 YY1 DUSP12 ENSG00000228606 RPSAP18 ATF6 ENSG00000238934 ENSG00000224985 ENSG00000227818 LOC148430 KLHDC9 FCER1G
GH01F160341 1.1 ENCODE 25.5 -75.7 -75737 3.3 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 NCSTN ENSG00000272668 C1orf204 RPSAP18 COPA GC01M160326 ENSG00000202078
GH01F161011 1.6 FANTOM5 ENCODE 16.2 -749.9 -749911 11.7 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 DUSP12 ARHGAP30 TSTD1 ENSG00000228606 FCGR2A USF1 RPSAP18 CD48 DEDD KLHDC9
GH01F160259 1.2 ENCODE 11.4 +5.4 5364 4.1 HDGF PKNOX1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 NCSTN ENSG00000272668 RPSAP18 ENSG00000228606 DCAF8
GH01F160291 1.2 ENCODE 11.3 -24.7 -24731 1.7 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 FEZF1 ZNF2 YY1 NCSTN ENSG00000228606 ENSG00000238934 ENSG00000224985 OR10J9P ENSG00000272668 OR10J1 RPSAP18 CASQ1 COPA
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP18 Gene

Chromosome:
1
Start:
160,266,269 bp from pter
End:
160,267,303 bp from pter
Size:
1,035 bases
Orientation:
Minus strand

Genomic View for RPSAP18 Gene

Genes around RPSAP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP18 Gene

Proteins for RPSAP18 Gene

Post-translational modifications for RPSAP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP18 Gene

Domains & Families for RPSAP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP18 Gene

Function for RPSAP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP18 Gene

Localization for RPSAP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP18 Gene

Pathways & Interactions for RPSAP18 Gene

SuperPathways for RPSAP18 Gene

No Data Available

Interacting Proteins for RPSAP18 Gene

Gene Ontology (GO) - Biological Process for RPSAP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP18 Gene

Transcripts for RPSAP18 Gene

mRNA/cDNA for RPSAP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP18 Gene

No ASD Table

Relevant External Links for RPSAP18 Gene

GeneLoc Exon Structure for
RPSAP18
ECgene alternative splicing isoforms for
RPSAP18

Expression for RPSAP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP18 Gene:

RPSAP18
genes like me logo Genes that share expression patterns with RPSAP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPSAP18 Gene

Orthologs for RPSAP18 Gene

Evolution for RPSAP18 Gene

ENSEMBL:
Gene Tree for RPSAP18 (if available)
TreeFam:
Gene Tree for RPSAP18 (if available)

No data available for Orthologs for RPSAP18 Gene

Paralogs for RPSAP18 Gene

No data available for Paralogs for RPSAP18 Gene

Variants for RPSAP18 Gene

Relevant External Links for RPSAP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP18 Gene

Disorders for RPSAP18 Gene

No disorders were found for RPSAP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP18 Gene

Publications for RPSAP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64

Products for RPSAP18 Gene

Sources for RPSAP18 Gene

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