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Aliases for RPSAP18 Gene

Aliases for RPSAP18 Gene

  • Ribosomal Protein SA Pseudogene 18 2 3 5
  • RPSA_4_107 3

External Ids for RPSAP18 Gene

Previous GeneCards Identifiers for RPSAP18 Gene

  • GC01M158504
  • GC01M160237

Summaries for RPSAP18 Gene

GeneCards Summary for RPSAP18 Gene

RPSAP18 (Ribosomal Protein SA Pseudogene 18) is a Pseudogene.

Additional gene information for RPSAP18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP18 Gene

Genomics for RPSAP18 Gene

Regulatory Elements for RPSAP18 Gene

Enhancers for RPSAP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H159881 1.8 FANTOM5 Ensembl ENCODE dbSUPER 36.6 +385.2 385168 1.7 PKNOX1 ATF7 FOS DEK ZNF491 ZNF518A ZNF592 MAFF SMARCA4 GLIS1 RPSAP18 ENSG00000272668 SNHG28 LOC100287049 COPA SLAMF8 PIGM DCAF8 CADM3 CADM3-AS1
GH01H161096 1.2 ENCODE 46 -830.4 -830376 2.9 HDGF PKNOX1 ARNT ARID4B SIN3A YBX1 FEZF1 ZNF2 YY1 ZNF302 USP21 DUSP12 PPOX LOC100287049 DEDD RPSAP18 LOC148430 DCAF8 NCSTN COPA
GH01H161011 1.8 FANTOM5 ENCODE dbSUPER 16.2 -749.9 -749911 11.7 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 ZC3H11A NFYC DUSP12 USP21 LOC100287049 DEDD TSTD1 LOC148430 PPOX ARHGAP30 KLHDC9 B4GALT3
GH01H160341 1.1 ENCODE 25.5 -75.7 -75737 3.3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 ZNF143 NCSTN SNHG28 RPSAP18 ENSG00000272668 USP21 DEDD B4GALT3 PPOX LOC100287049 ENSG00000256029
GH01H161130 1.2 ENCODE 21.5 -865.1 -865078 3.9 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF2 YY1 USP21 DUSP12 LOC100287049 DEDD PPOX B4GALT3 NCSTN ATF6 DCAF8 COPA
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP18 Gene

Genomic Locations for RPSAP18 Gene
chr1:160,266,269-160,267,303
(GRCh38/hg38)
Size:
1,035 bases
Orientation:
Minus strand
chr1:160,236,059-160,237,093
(GRCh37/hg19)

Genomic View for RPSAP18 Gene

Genes around RPSAP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP18 Gene

Proteins for RPSAP18 Gene

Post-translational modifications for RPSAP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP18 Gene

Domains & Families for RPSAP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP18 Gene

Function for RPSAP18 Gene

Phenotypes From GWAS Catalog for RPSAP18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP18 Gene

Localization for RPSAP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP18 Gene

Pathways & Interactions for RPSAP18 Gene

SuperPathways for RPSAP18 Gene

No Data Available

Interacting Proteins for RPSAP18 Gene

Gene Ontology (GO) - Biological Process for RPSAP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP18 Gene

Drugs & Compounds for RPSAP18 Gene

No Compound Related Data Available

Transcripts for RPSAP18 Gene

mRNA/cDNA for RPSAP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP18 Gene

No ASD Table

Relevant External Links for RPSAP18 Gene

GeneLoc Exon Structure for
RPSAP18
ECgene alternative splicing isoforms for
RPSAP18

Expression for RPSAP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP18 Gene:

RPSAP18
genes like me logo Genes that share expression patterns with RPSAP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP18 Gene

Orthologs for RPSAP18 Gene

Evolution for RPSAP18 Gene

ENSEMBL:
Gene Tree for RPSAP18 (if available)
TreeFam:
Gene Tree for RPSAP18 (if available)

No data available for Orthologs for RPSAP18 Gene

Paralogs for RPSAP18 Gene

No data available for Paralogs for RPSAP18 Gene

Variants for RPSAP18 Gene

Relevant External Links for RPSAP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP18 Gene

Disorders for RPSAP18 Gene

No disorders were found for RPSAP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP18 Gene

Publications for RPSAP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi DJ … Shiio Y (Journal of proteome research 2014) 3 60

Products for RPSAP18 Gene

Sources for RPSAP18 Gene

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