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Aliases for RPSAP11 Gene

Aliases for RPSAP11 Gene

  • Ribosomal Protein SA Pseudogene 11 2 3 5
  • Laminin Receptor 1 Pseudogene 11 2 3
  • Laminin Receptor-Like 1 2 3
  • RPSA_9_357 3
  • LAMR1P11 3
  • LAMRP1 3
  • LAMRL1 3
  • LamR 3

External Ids for RPSAP11 Gene

Previous HGNC Symbols for RPSAP11 Gene

  • LAMRL1
  • LAMR1P11

Previous GeneCards Identifiers for RPSAP11 Gene

  • GC03U900628
  • GC03P032209
  • GC03P032233
  • GC03P032234

Summaries for RPSAP11 Gene

GeneCards Summary for RPSAP11 Gene

RPSAP11 (Ribosomal Protein SA Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP11 Gene

Genomics for RPSAP11 Gene

Regulatory Elements for RPSAP11 Gene

Enhancers for RPSAP11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G032177 1.2 Ensembl ENCODE 11.9 -13.0 -12966 1.2 PKNOX1 MLX WRNIP1 ARID4B YY1 GATA2 ZNF143 ZNF263 REST KAT8 RPSAP11 CMTM8 KRT18P15 RPL31P18 CMTM6 OSBPL10 ENSG00000236732
GH03G032144 1.1 Ensembl ENCODE 5.1 -46.3 -46253 0.8 ELF3 FOXA2 RB1 NFIB DMAP1 ZNF48 RAD21 YY1 RARA FOS GPD1L RPSAP11 ENSG00000236732
GH03G032175 0.7 ENCODE 0.4 -14.9 -14868 0.2 CTCF ZNF654 TRIM22 RAD21 ZBTB40 FOXA1 YY1 JUND NFIC SMC3 CMTM8 KRT18P15 RPSAP11 ENSG00000236732
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP11 Gene

Chromosome:
3
Start:
32,190,671 bp from pter
End:
32,191,697 bp from pter
Size:
1,027 bases
Orientation:
Plus strand

Genomic View for RPSAP11 Gene

Genes around RPSAP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP11 Gene

Proteins for RPSAP11 Gene

Post-translational modifications for RPSAP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP11 Gene

Domains & Families for RPSAP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP11 Gene

Function for RPSAP11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP11 Gene

Localization for RPSAP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP11 Gene

Pathways & Interactions for RPSAP11 Gene

SuperPathways for RPSAP11 Gene

No Data Available

Interacting Proteins for RPSAP11 Gene

Gene Ontology (GO) - Biological Process for RPSAP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP11 Gene

Drugs & Compounds for RPSAP11 Gene

No Compound Related Data Available

Transcripts for RPSAP11 Gene

mRNA/cDNA for RPSAP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP11 Gene

No ASD Table

Relevant External Links for RPSAP11 Gene

GeneLoc Exon Structure for
RPSAP11
ECgene alternative splicing isoforms for
RPSAP11

Expression for RPSAP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP11 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP11 Gene

This gene is overexpressed in Muscle - Skeletal (x5.0).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP11 Gene:

RPSAP11
genes like me logo Genes that share expression patterns with RPSAP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP11 Gene

Orthologs for RPSAP11 Gene

Evolution for RPSAP11 Gene

ENSEMBL:
Gene Tree for RPSAP11 (if available)
TreeFam:
Gene Tree for RPSAP11 (if available)

No data available for Orthologs for RPSAP11 Gene

Paralogs for RPSAP11 Gene

No data available for Paralogs for RPSAP11 Gene

Variants for RPSAP11 Gene

Relevant External Links for RPSAP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP11 Gene

Disorders for RPSAP11 Gene

Relevant External Links for RPSAP11

Genetic Association Database (GAD)
RPSAP11

No disorders were found for RPSAP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP11 Gene

Publications for RPSAP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genomic analysis of the 67-kDa laminin receptor in normal and pathological tissues: circumstantial evidence for retroposon features. (PMID: 1649122) Bignon C. … Martin P.M. (Genomics 1991) 2 3 64
  3. Genome-wide significant association between alcohol dependence and a variant in the ADH gene cluster. (PMID: 22004471) Frank J. … Rietschel M. (Addict Biol 2012) 46 64
  4. Crystal structure of the human laminin receptor precursor. (PMID: 18063583) Jamieson K.V. … Meruelo D. (J. Biol. Chem. 2008) 3 64

Products for RPSAP11 Gene

Sources for RPSAP11 Gene

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