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Aliases for RPSAP10 Gene

Aliases for RPSAP10 Gene

  • Ribosomal Protein SA Pseudogene 10 2 3 5
  • RPSA_22_1026 3
  • LAMR1P10 3

External Ids for RPSAP10 Gene

Previous GeneCards Identifiers for RPSAP10 Gene

  • GC10P028766

Summaries for RPSAP10 Gene

GeneCards Summary for RPSAP10 Gene

RPSAP10 (Ribosomal Protein SA Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP10 Gene

Genomics for RPSAP10 Gene

Regulatory Elements for RPSAP10 Gene

Enhancers for RPSAP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G028432 1 Ensembl ENCODE 0.7 -3.8 -3794 0.7 ELF3 CTCF PTBP1 NFIB DEAF1 RAD21 YY1 GATA3 GATA2 ZNF143 WAC-AS1 WAC RPSAP10 ENSG00000222666
GH10G028431 0.7 ENCODE 0.7 -4.8 -4840 0.2 ESRRA TEAD3 FOSL1 FOXM1 FOS NR2F6 GATAD2A ZNF3 PPARG ATF2 RPSAP10 ENSG00000222666
GH10G028411 1.4 FANTOM5 ENCODE dbSUPER 0.3 -24.2 -24245 0.5 KLF1 ZBTB21 KLF17 CEBPG CTBP1 ZNF316 GATA3 EED FOS PRDM10 ENSG00000222666 RPSAP10
GH10G028437 0.3 FANTOM5 0.7 +0.9 946 0.0 ENSG00000222666 RPSAP10 RN7SKP39
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPSAP10 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPSAP10 Gene

Chromosome:
10
Start:
28,436,126 bp from pter
End:
28,437,151 bp from pter
Size:
1,026 bases
Orientation:
Plus strand

Genomic View for RPSAP10 Gene

Genes around RPSAP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP10 Gene

Proteins for RPSAP10 Gene

Post-translational modifications for RPSAP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP10 Gene

Domains & Families for RPSAP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP10 Gene

Function for RPSAP10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP10 Gene

Localization for RPSAP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPSAP10 Gene

Pathways & Interactions for RPSAP10 Gene

SuperPathways for RPSAP10 Gene

No Data Available

Interacting Proteins for RPSAP10 Gene

Gene Ontology (GO) - Biological Process for RPSAP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP10 Gene

Transcripts for RPSAP10 Gene

mRNA/cDNA for RPSAP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP10 Gene

No ASD Table

Relevant External Links for RPSAP10 Gene

GeneLoc Exon Structure for
RPSAP10
ECgene alternative splicing isoforms for
RPSAP10

Expression for RPSAP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP10 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP10 Gene

This gene is overexpressed in Testis (x36.9).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP10 Gene:

RPSAP10
genes like me logo Genes that share expression patterns with RPSAP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP10 Gene

Orthologs for RPSAP10 Gene

Evolution for RPSAP10 Gene

ENSEMBL:
Gene Tree for RPSAP10 (if available)
TreeFam:
Gene Tree for RPSAP10 (if available)

No data available for Orthologs for RPSAP10 Gene

Paralogs for RPSAP10 Gene

No data available for Paralogs for RPSAP10 Gene

Variants for RPSAP10 Gene

Relevant External Links for RPSAP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP10 Gene

Disorders for RPSAP10 Gene

No disorders were found for RPSAP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP10 Gene

Publications for RPSAP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64

Products for RPSAP10 Gene

Sources for RPSAP10 Gene

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