Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS9P4 Gene

Aliases for RPS9P4 Gene

  • Ribosomal Protein S9 Pseudogene 4 2 3
  • RPS9_1_1662 3
  • CTB-33G10.1 5

External Ids for RPS9P4 Gene

Previous GeneCards Identifiers for RPS9P4 Gene

  • GC19M054917
  • GC19M050224

Summaries for RPS9P4 Gene

GeneCards Summary for RPS9P4 Gene

RPS9P4 (Ribosomal Protein S9 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS9P4 Gene

Genomics for RPS9P4 Gene

Regulatory Elements for RPS9P4 Gene

Enhancers for RPS9P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F049441 0.2 ENCODE 12.5 +277.0 277010 2.7 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A YBX1 DMAP1 ZNF2 ALDH16A1 TEAD2 PRR12 GRWD1 PLEKHA4 ENSG00000268157 ENSG00000197813 RRAS RPS9P4 SNORD35A
GH19F049858 1.2 ENCODE 12.5 -137.1 -137142 0.2 KLF1 INSM2 KLF17 ZMYM3 ZNF2 ZFHX2 POLR2A KLF7 ZNF548 KLF8 RPS9P4 SNORD35A POLD1 ADM5 NUP62 PRR12 SNORD35B ALDH16A1 GC19P049856 PTOV1-AS2
GH19F050022 0.2 ENCODE 12.5 -304.7 -304685 4.5 HDGF PKNOX1 ARNT CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 SIGLEC16 NUP62 POLD1 TEAD2 ENSG00000268157 SNORD35A PTOV1-AS2 PRR12 ALDH16A1 SNORD35B
GH19F050175 0.2 ENCODE 12.4 -456.5 -456500 1.3 HDGF PKNOX1 ATF1 ZNF133 SIN3A GLI4 YBX1 ZNF48 GLIS2 ZNF143 PRR12 NUP62 SNORD35A POLD1 ADM5 PIH1D1 SNORD35B ALDH16A1 ENSG00000268375 GPR32
GH19F050678 1 Ensembl ENCODE 12.4 -959.3 -959340 1.2 HDGF PKNOX1 ATF1 ZNF133 SIN3A YBX1 GLI4 ZNF48 BRCA1 GLIS2 ZNF175 NUP62 POLD1 ADM5 ENSG00000268047 CTU1 RPS9P4 PTOV1-AS2 AKT1S1 PIR41386
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS9P4 on UCSC Golden Path with GeneCards custom track

Promoters for RPS9P4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001818449 137 400 BCOR ZMYM3 ZBTB33 ZKSCAN1

Genomic Location for RPS9P4 Gene

Chromosome:
19
Start:
49,719,426 bp from pter
End:
49,720,137 bp from pter
Size:
712 bases
Orientation:
Minus strand

Genomic View for RPS9P4 Gene

Genes around RPS9P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS9P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS9P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS9P4 Gene

Proteins for RPS9P4 Gene

Post-translational modifications for RPS9P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS9P4 Gene

Domains & Families for RPS9P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS9P4 Gene

Function for RPS9P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS9P4 Gene

Localization for RPS9P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS9P4 Gene

Pathways & Interactions for RPS9P4 Gene

SuperPathways for RPS9P4 Gene

No Data Available

Interacting Proteins for RPS9P4 Gene

Gene Ontology (GO) - Biological Process for RPS9P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS9P4 Gene

Transcripts for RPS9P4 Gene

mRNA/cDNA for RPS9P4 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS9P4 Gene

No ASD Table

Relevant External Links for RPS9P4 Gene

GeneLoc Exon Structure for
RPS9P4
ECgene alternative splicing isoforms for
RPS9P4

Expression for RPS9P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS9P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS9P4 Gene:

RPS9P4
genes like me logo Genes that share expression patterns with RPS9P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS9P4 Gene

Orthologs for RPS9P4 Gene

Evolution for RPS9P4 Gene

ENSEMBL:
Gene Tree for RPS9P4 (if available)
TreeFam:
Gene Tree for RPS9P4 (if available)

No data available for Orthologs for RPS9P4 Gene

Paralogs for RPS9P4 Gene

No data available for Paralogs for RPS9P4 Gene

Variants for RPS9P4 Gene

Relevant External Links for RPS9P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS9P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS9P4 Gene

Disorders for RPS9P4 Gene

Relevant External Links for RPS9P4

Genetic Association Database (GAD)
RPS9P4

No disorders were found for RPS9P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS9P4 Gene

Publications for RPS9P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study of panic disorder in the Japanese population. (PMID: 19165232) Otowa T. … Okazaki Y. (J. Hum. Genet. 2009) 3 46 64

Products for RPS9P4 Gene

Sources for RPS9P4 Gene

Content
Loading form....