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Aliases for RPS9P3 Gene

Aliases for RPS9P3 Gene

  • Ribosomal Protein S9 Pseudogene 3 2 3
  • CTD-2007H13.1 5
  • RPS9_1_598 3

External Ids for RPS9P3 Gene

Previous GeneCards Identifiers for RPS9P3 Gene

  • GC05P098318

Summaries for RPS9P3 Gene

GeneCards Summary for RPS9P3 Gene

RPS9P3 (Ribosomal Protein S9 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS9P3 Gene

Genomics for RPS9P3 Gene

Regulatory Elements for RPS9P3 Gene

Enhancers for RPS9P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G098938 1.1 Ensembl ENCODE dbSUPER 0.4 -15.6 -15598 1.4 SOX5 SOX13 FOXA2 RFX1 HHEX TEAD3 TBX3 JUND RNU6-402P RGMB-AS1 ENSG00000200351 GC05M098937 RPS9P3
GH05G098940 1 Ensembl ENCODE dbSUPER 0.4 -13.0 -12968 2.0 CTCF POLR2A SMARCA4 NR2F2 RNU6-402P RGMB-AS1 ENSG00000200351 GC05M098937 RPS9P3
GH05G098936 0.2 dbSUPER 0.4 -17.4 -17375 1.5 RNU6-402P CHD1 GC05M098937 ENSG00000200351 RPS9P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS9P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS9P3 Gene

Chromosome:
5
Start:
98,954,369 bp from pter
End:
98,955,009 bp from pter
Size:
641 bases
Orientation:
Plus strand

Genomic View for RPS9P3 Gene

Genes around RPS9P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS9P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS9P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS9P3 Gene

Proteins for RPS9P3 Gene

Post-translational modifications for RPS9P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS9P3 Gene

Domains & Families for RPS9P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS9P3 Gene

Function for RPS9P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS9P3 Gene

Localization for RPS9P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS9P3 Gene

Pathways & Interactions for RPS9P3 Gene

SuperPathways for RPS9P3 Gene

No Data Available

Interacting Proteins for RPS9P3 Gene

Gene Ontology (GO) - Biological Process for RPS9P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS9P3 Gene

Drugs & Compounds for RPS9P3 Gene

No Compound Related Data Available

Transcripts for RPS9P3 Gene

mRNA/cDNA for RPS9P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS9P3 Gene

No ASD Table

Relevant External Links for RPS9P3 Gene

GeneLoc Exon Structure for
RPS9P3
ECgene alternative splicing isoforms for
RPS9P3

Expression for RPS9P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS9P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS9P3 Gene:

RPS9P3
genes like me logo Genes that share expression patterns with RPS9P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS9P3 Gene

Orthologs for RPS9P3 Gene

Evolution for RPS9P3 Gene

ENSEMBL:
Gene Tree for RPS9P3 (if available)
TreeFam:
Gene Tree for RPS9P3 (if available)

No data available for Orthologs for RPS9P3 Gene

Paralogs for RPS9P3 Gene

No data available for Paralogs for RPS9P3 Gene

Variants for RPS9P3 Gene

Relevant External Links for RPS9P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS9P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS9P3 Gene

Disorders for RPS9P3 Gene

Relevant External Links for RPS9P3

Genetic Association Database (GAD)
RPS9P3

No disorders were found for RPS9P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS9P3 Gene

Publications for RPS9P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Heritability and genome-wide association analysis of renal sinus fat accumulation in the Framingham Heart Study. (PMID: 22044751) Foster M.C. … Fox C.S. (BMC Med. Genet. 2011) 46 64
  3. Genome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease. (PMID: 20708005) Chalasani N. … Rotter J.I. (Gastroenterology 2010) 46 64
  4. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64

Products for RPS9P3 Gene

Sources for RPS9P3 Gene

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