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Aliases for RPS7P5 Gene

Aliases for RPS7P5 Gene

  • Ribosomal Protein S7 Pseudogene 5 2 3
  • RPS7_2_183 3

External Ids for RPS7P5 Gene

Summaries for RPS7P5 Gene

GeneCards Summary for RPS7P5 Gene

RPS7P5 (Ribosomal Protein S7 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS7P5 Gene

Genomics for RPS7P5 Gene

Genomic Location for RPS7P5 Gene

Start:
240,007,524 bp from pter
End:
240,013,260 bp from pter
Size:
5,737 bases
Orientation:
Plus strand

Genomic View for RPS7P5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RPS7P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS7P5 Gene

No data available for Regulatory Elements for RPS7P5 Gene

Proteins for RPS7P5 Gene

Post-translational modifications for RPS7P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS7P5 Gene

Domains for RPS7P5 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for RPS7P5 Gene

Function for RPS7P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RPS7P5 Gene

Localization for RPS7P5 Gene

No data available for Gene Ontology (GO) - Cellular Components for RPS7P5 Gene

Pathways for RPS7P5 Gene

SuperPathways for RPS7P5 Gene

No Data Available

Interacting Proteins for RPS7P5 Gene

Gene Ontology (GO) - Biological Process for RPS7P5 Gene

None

No data available for Pathways by source for RPS7P5 Gene

Transcripts for RPS7P5 Gene

mRNA/cDNA for RPS7P5 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPS7P5 Gene

Ribosomal protein S7 pseudogene 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPS7P5 Gene

No ASD Table

Relevant External Links for RPS7P5 Gene

GeneLoc Exon Structure for
RPS7P5
ECgene alternative splicing isoforms for
RPS7P5

Expression for RPS7P5 Gene

mRNA expression in normal human tissues for RPS7P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPS7P5 Gene

This gene is overexpressed in Testis (52.7).

SOURCE GeneReport for Unigene cluster for RPS7P5 Gene Hs.613280

genes like me logo Genes that share expressions with RPS7P5: view

Orthologs for RPS7P5 Gene

Evolution for RPS7P5 Gene

ENSEMBL:
Gene Tree for RPS7P5 (if available)
TreeFam:
Gene Tree for RPS7P5 (if available)

No data available for Orthologs for RPS7P5 Gene

Paralogs for RPS7P5 Gene

No data available for Paralogs for RPS7P5 Gene

Variants for RPS7P5 Gene

Sequence variations from dbSNP and Humsavar for RPS7P5 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs922306 -- 240,010,991(-) CCCTG(C/T)GAAAG intron-variant
rs1236993 -- 240,007,932(-) tttgt(G/T)tggca intron-variant
rs2065914 -- 240,007,496(+) TTCAT(C/T)TACAG upstream-variant-2KB
rs2126382 -- 240,007,922(-) AAATT(A/G)TTTTC intron-variant
rs2126383 -- 240,007,920(-) attgt(G/T)ttcct intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPS7P5 Gene

Variant ID Type Subtype PubMed ID
nsv873351 CNV Gain 21882294
dgv194e1 CNV Complex 17122850
esv35011 CNV Gain 17911159
essv4530 CNV CNV 17122850
dgv553n71 CNV Gain 21882294
nsv827531 CNV Gain 20364138
nsv873355 CNV Gain 21882294
nsv519393 CNV Gain 19592680
nsv873357 CNV Loss 21882294
nsv519885 CNV Gain 19592680
nsv827542 CNV Gain 20364138

Relevant External Links for RPS7P5 Gene

HapMap Linkage Disequilibrium report
RPS7P5

Disorders for RPS7P5 Gene

Relevant External Links for RPS7P5

Genetic Association Database (GAD)
RPS7P5
genes like me logo Genes that share disorders with RPS7P5: view

No data available for UniProtKB/Swiss-Prot for RPS7P5 Gene

Publications for RPS7P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 49
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 49
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 49
  5. Framingham Heart Study 100K project: genome-wide associations for cardiovascular disease outcomes. (PMID: 17903304) Larson M.G. … Levy D. (BMC Med. Genet. 2007) 49

Products for RPS7P5 Gene

Sources for RPS7P5 Gene

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