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Aliases for RPS6P8 Gene

Subcategory (RNA class) for RPS6P8 Gene

lncRNA

Aliases for RPS6P8 Gene

  • Ribosomal Protein S6 Pseudogene 8 2 3 5
  • RPS6_3_713 3

External Ids for RPS6P8 Gene

ORGUL Members for RPS6P8 Gene

Previous GeneCards Identifiers for RPS6P8 Gene

  • GC06M074159
  • GC06M074102

Summaries for RPS6P8 Gene

GeneCards Summary for RPS6P8 Gene

RPS6P8 (Ribosomal Protein S6 Pseudogene 8) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P8 Gene

Genomics for RPS6P8 Gene

Regulatory Elements for RPS6P8 Gene

Enhancers for RPS6P8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G073421 1.1 Ensembl ENCODE 11.8 -30.7 -30671 2.0 HDAC1 TBP PKNOX1 CBX3 ATF1 NFRKB TCF12 ZNF766 CREM ZBTB11 DDX43 OOEP RPS6P8 RPL39P3 OOEP-AS1 MB21D1
GH06G073348 0.5 ENCODE 10.3 +42.4 42429 2.2 BCL11A POU5F1 KDM1A CHD7 ETS1 OOEP-AS1 RPL39P3 OOEP KHDC1 RPS6P8 DDX43 MTO1 SLC17A5 DPPA5 PAICSP3
GH06G073277 0.3 FANTOM5 10.6 +113.7 113737 0.3 KHDC1 RPS6P8 OOEP DDX43 ENSG00000229852 RPSAP41
GH06G073272 0.3 FANTOM5 10.4 +119.7 119712 0.0 KHDC1 DPPA5 KHDC3L RPS6P8 OOEP DDX43 ENSG00000229852 RPSAP41
GH06G073388 1.3 Ensembl ENCODE 0.7 +2.8 2758 1.3 ATF1 CREB3L1 ARNT ZNF2 ZNF766 GLIS2 GATA2 ELK1 KLF7 GTF2B KHDC3L DPPA5 RPS6P8 RPL39P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS6P8 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS6P8 Gene

Chromosome:
6
Start:
73,391,038 bp from pter
End:
73,391,767 bp from pter
Size:
730 bases
Orientation:
Minus strand

Genomic View for RPS6P8 Gene

Genes around RPS6P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P8 Gene

Proteins for RPS6P8 Gene

Post-translational modifications for RPS6P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P8 Gene

Domains & Families for RPS6P8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P8 Gene

Function for RPS6P8 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P8 Gene

Localization for RPS6P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS6P8 Gene

Pathways & Interactions for RPS6P8 Gene

SuperPathways for RPS6P8 Gene

No Data Available

Interacting Proteins for RPS6P8 Gene

Gene Ontology (GO) - Biological Process for RPS6P8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6P8 Gene

Drugs & Compounds for RPS6P8 Gene

No Compound Related Data Available

Transcripts for RPS6P8 Gene

mRNA/cDNA for RPS6P8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P8 Gene

No ASD Table

Relevant External Links for RPS6P8 Gene

GeneLoc Exon Structure for
RPS6P8
ECgene alternative splicing isoforms for
RPS6P8

Expression for RPS6P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P8 Gene

mRNA differential expression in normal tissues according to GTEx for RPS6P8 Gene

This gene is overexpressed in Testis (x7.4).

NURSA nuclear receptor signaling pathways regulating expression of RPS6P8 Gene:

RPS6P8
genes like me logo Genes that share expression patterns with RPS6P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P8 Gene

Orthologs for RPS6P8 Gene

Evolution for RPS6P8 Gene

ENSEMBL:
Gene Tree for RPS6P8 (if available)
TreeFam:
Gene Tree for RPS6P8 (if available)

No data available for Orthologs for RPS6P8 Gene

Paralogs for RPS6P8 Gene

No data available for Paralogs for RPS6P8 Gene

Variants for RPS6P8 Gene

Relevant External Links for RPS6P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P8 Gene

Disorders for RPS6P8 Gene

No disorders were found for RPS6P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS6P8 Gene

Publications for RPS6P8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS6P8 Gene

Sources for RPS6P8 Gene

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