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Aliases for RPS6P3 Gene

Subcategory (RNA class) for RPS6P3 Gene

lncRNA

Aliases for RPS6P3 Gene

  • Ribosomal Protein S6 Pseudogene 3 2 3
  • RPS6_1_251 3
  • AC092570.3 5

External Ids for RPS6P3 Gene

ORGUL Members for RPS6P3 Gene

Previous GeneCards Identifiers for RPS6P3 Gene

  • GC02M102126

Summaries for RPS6P3 Gene

GeneCards Summary for RPS6P3 Gene

RPS6P3 (Ribosomal Protein S6 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS6P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P3 Gene

Genomics for RPS6P3 Gene

Regulatory Elements for RPS6P3 Gene

Enhancers for RPS6P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H101514 1.5 FANTOM5 Ensembl ENCODE 0.4 -7.7 -7681 6 ELF3 FOXA2 ARID4B RAD21 RARA SCRT2 FOS ATF7 THAP11 ZNF654 RFX8 LINC01870 SNORD89 MAP4K4 LOC100421289 RPS6P3
GH02H101499 0.7 Ensembl ENCODE 0.4 +9.2 9175 2 ZNF547 SCRT2 ZNF7 RFX8 LINC01870 RPS6P3
GH02H101509 0.2 ENCODE 0.7 +0.7 690 0 LINC01870 RFX8 RPS6P3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS6P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS6P3 Gene

Chromosome:
2
Start:
101,509,521 bp from pter
End:
101,510,343 bp from pter
Size:
823 bases
Orientation:
Minus strand

Genomic View for RPS6P3 Gene

Genes around RPS6P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P3 Gene

Proteins for RPS6P3 Gene

Post-translational modifications for RPS6P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P3 Gene

Domains & Families for RPS6P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P3 Gene

Function for RPS6P3 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS6P3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P3 Gene

Localization for RPS6P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6P3 Gene

Pathways & Interactions for RPS6P3 Gene

SuperPathways for RPS6P3 Gene

No Data Available

Interacting Proteins for RPS6P3 Gene

Gene Ontology (GO) - Biological Process for RPS6P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6P3 Gene

Drugs & Compounds for RPS6P3 Gene

No Compound Related Data Available

Transcripts for RPS6P3 Gene

mRNA/cDNA for RPS6P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS6P3
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P3 Gene

No ASD Table

Relevant External Links for RPS6P3 Gene

GeneLoc Exon Structure for
RPS6P3
ECgene alternative splicing isoforms for
RPS6P3

Expression for RPS6P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS6P3 Gene:

RPS6P3
genes like me logo Genes that share expression patterns with RPS6P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P3 Gene

Orthologs for RPS6P3 Gene

Evolution for RPS6P3 Gene

ENSEMBL:
Gene Tree for RPS6P3 (if available)
TreeFam:
Gene Tree for RPS6P3 (if available)

No data available for Orthologs for RPS6P3 Gene

Paralogs for RPS6P3 Gene

No data available for Paralogs for RPS6P3 Gene

Variants for RPS6P3 Gene

Relevant External Links for RPS6P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P3 Gene

Disorders for RPS6P3 Gene

Relevant External Links for RPS6P3

Genetic Association Database (GAD)
RPS6P3

No disorders were found for RPS6P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P3 Gene

Publications for RPS6P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS6P3 Gene

Sources for RPS6P3 Gene

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