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Aliases for RPS6P20 Gene

Subcategory (RNA class) for RPS6P20 Gene


Aliases for RPS6P20 Gene

  • Ribosomal Protein S6 Pseudogene 20 2 3 5
  • RPS6_10_1296 3

External Ids for RPS6P20 Gene

ORGUL Members for RPS6P20 Gene

Previous GeneCards Identifiers for RPS6P20 Gene

  • GC12U901071
  • GC12M131777

Summaries for RPS6P20 Gene

GeneCards Summary for RPS6P20 Gene

RPS6P20 (Ribosomal Protein S6 Pseudogene 20) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P20 Gene

Genomics for RPS6P20 Gene

Regulatory Elements for RPS6P20 Gene

Enhancers for RPS6P20 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G131228 1.8 FANTOM5 Ensembl ENCODE dbSUPER 8.7 +63.0 62999 2.8 HDGF PKNOX1 CREB3L1 ARNT FEZF1 TCF12 GLIS2 GATA2 KDM4B ZNF263 RPS6P20 ENSG00000256250 LINC02370 ENSG00000280217 LINC01257
GH12G131233 1 ENCODE dbSUPER 4.7 +58.8 58830 1.7 PKNOX1 NFIB BMI1 ZFHX2 GATA3 SCRT2 RFX1 ZNF687 MNT ZNF398 LINC01257 ENSG00000256250 RPS6P20 ENSG00000280217
GH12G131246 0.6 dbSUPER 7.8 +46.1 46117 1.9 PKNOX1 L3MBTL2 ZSCAN4 EP300 ZNF592 FOXM1 SMARCA4 MGA RPS6P20 LINC01257 ENSG00000280217 LOC105370082
GH12G131283 0.9 Ensembl dbSUPER 0.4 +8.9 8878 1.0 SMARCA5 HDGF MCM3 L3MBTL2 CDC5L ATF2 ZKSCAN1 MCM7 CTBP1 ZNF354C EP400 STX2 SFSWAP RPS6P20 LOC105370082
GH12G131266 0.8 dbSUPER 0.3 +24.2 24158 4.9 CTCF ATF1 NFIB RAD21 CHAMP1 FOSL1 E2F1 ZNF316 ZNF143 SMC3 LOC105370082 RPS6P20
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS6P20 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS6P20 Gene

131,292,068 bp from pter
131,293,176 bp from pter
1,109 bases
Minus strand

Genomic View for RPS6P20 Gene

Genes around RPS6P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P20 Gene

Proteins for RPS6P20 Gene

Post-translational modifications for RPS6P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P20 Gene

Domains & Families for RPS6P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P20 Gene

Function for RPS6P20 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P20 Gene

Localization for RPS6P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS6P20 Gene

Pathways & Interactions for RPS6P20 Gene

SuperPathways for RPS6P20 Gene

No Data Available

Interacting Proteins for RPS6P20 Gene

Gene Ontology (GO) - Biological Process for RPS6P20 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS6P20 Gene

Drugs & Compounds for RPS6P20 Gene

No Compound Related Data Available

Transcripts for RPS6P20 Gene

mRNA/cDNA for RPS6P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P20 Gene

No ASD Table

Relevant External Links for RPS6P20 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS6P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P20 Gene

mRNA differential expression in normal tissues according to GTEx for RPS6P20 Gene

This gene is overexpressed in Testis (x52.2).

NURSA nuclear receptor signaling pathways regulating expression of RPS6P20 Gene:

genes like me logo Genes that share expression patterns with RPS6P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P20 Gene

Orthologs for RPS6P20 Gene

Evolution for RPS6P20 Gene

Gene Tree for RPS6P20 (if available)
Gene Tree for RPS6P20 (if available)

No data available for Orthologs for RPS6P20 Gene

Paralogs for RPS6P20 Gene

No data available for Paralogs for RPS6P20 Gene

Variants for RPS6P20 Gene

Relevant External Links for RPS6P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P20 Gene

Disorders for RPS6P20 Gene

Relevant External Links for RPS6P20

Genetic Association Database (GAD)

No disorders were found for RPS6P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P20 Gene

Publications for RPS6P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genomic variation associated with mortality among adults of European and African ancestry with heart failure: the cohorts for heart and aging research in genomic epidemiology consortium. (PMID: 20400778) Morrison A.C. … Smith N.L. (Circ Cardiovasc Genet 2010) 46 64
  3. Joint influence of small-effect genetic variants on human longevity. (PMID: 20834067) Yashin A.I. … Ukraintseva S.V. (Aging (Albany NY) 2010) 46 64
  4. A genome-wide association study identifies protein quantitative trait loci (pQTLs). (PMID: 18464913) Melzer D. … Ferrucci L. (PLoS Genet. 2008) 46 64

Products for RPS6P20 Gene

Sources for RPS6P20 Gene

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