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Aliases for RPS6P18 Gene

Aliases for RPS6P18 Gene

  • Ribosomal Protein S6 Pseudogene 18 2 3
  • RPS6_8_1191 3
  • AC007618.3 5

External Ids for RPS6P18 Gene

Previous GeneCards Identifiers for RPS6P18 Gene

  • GC12U901103
  • GC12P002771
  • GC12P002772

Summaries for RPS6P18 Gene

GeneCards Summary for RPS6P18 Gene

RPS6P18 (Ribosomal Protein S6 Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P18 Gene

Genomics for RPS6P18 Gene

Regulatory Elements for RPS6P18 Gene

Enhancers for RPS6P18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G002639 1 Ensembl ENCODE 0.4 -19.1 -19107 1.8 CTCF PKNOX1 JUN SIN3A ZIC2 RAD21 FOSL1 ZFHX2 POLR2A GATA2 RPS6P18 CACNA1C-AS3
GH12G002615 1.2 FANTOM5 Ensembl ENCODE 0.3 -43.7 -43668 1.3 ZBTB21 ZIC2 ZFHX2 GLIS2 POLR2A FOS NFE2L2 EGR2 BHLHE40 ZNF398 CACNA1C-AS3 RPS6P18
GH12G002631 0.7 Ensembl ENCODE 0.3 -27.9 -27879 1.1 MAX NR2F2 CACNA1C-AS3 RPS6P18
GH12G002624 0.7 ENCODE 0.3 -35.0 -34986 1.5 CTCF MAFG DPF2 RAD21 NR2F2 GATA3 ZNF316 SMC3 FOSL2 FOS CBX3P4 FKBP4 ITFG2 CACNA1C-AS3 RPS6P18
GH12G002612 0.9 Ensembl ENCODE 0.2 -46.2 -46156 2.3 BHLHE40 SIN3A TSHZ1 ZEB2 ZIC2 JUND ZNF629 SCRT2 ZNF600 ZNF24 CACNA1C-AS3 RPS6P18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS6P18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS6P18 Gene

Chromosome:
12
Start:
2,659,895 bp from pter
End:
2,660,969 bp from pter
Size:
1,075 bases
Orientation:
Plus strand

Genomic View for RPS6P18 Gene

Genes around RPS6P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P18 Gene

Proteins for RPS6P18 Gene

Post-translational modifications for RPS6P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P18 Gene

Domains & Families for RPS6P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P18 Gene

Function for RPS6P18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P18 Gene

Localization for RPS6P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS6P18 Gene

Pathways & Interactions for RPS6P18 Gene

SuperPathways for RPS6P18 Gene

No Data Available

Interacting Proteins for RPS6P18 Gene

Gene Ontology (GO) - Biological Process for RPS6P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6P18 Gene

Drugs & Compounds for RPS6P18 Gene

No Compound Related Data Available

Transcripts for RPS6P18 Gene

mRNA/cDNA for RPS6P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P18 Gene

No ASD Table

Relevant External Links for RPS6P18 Gene

GeneLoc Exon Structure for
RPS6P18
ECgene alternative splicing isoforms for
RPS6P18

Expression for RPS6P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS6P18 Gene:

RPS6P18
genes like me logo Genes that share expression patterns with RPS6P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P18 Gene

Orthologs for RPS6P18 Gene

Evolution for RPS6P18 Gene

ENSEMBL:
Gene Tree for RPS6P18 (if available)
TreeFam:
Gene Tree for RPS6P18 (if available)

No data available for Orthologs for RPS6P18 Gene

Paralogs for RPS6P18 Gene

No data available for Paralogs for RPS6P18 Gene

Variants for RPS6P18 Gene

Relevant External Links for RPS6P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P18 Gene

Disorders for RPS6P18 Gene

Relevant External Links for RPS6P18

Genetic Association Database (GAD)
RPS6P18

No disorders were found for RPS6P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P18 Gene

Publications for RPS6P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae. (PMID: 19197348) Lowe J.K. … Friedman J.M. (PLoS Genet. 2009) 46 64

Products for RPS6P18 Gene

Sources for RPS6P18 Gene

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