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Aliases for RPS6P15 Gene

Subcategory (RNA class) for RPS6P15 Gene

lncRNA

Aliases for RPS6P15 Gene

  • Ribosomal Protein S6 Pseudogene 15 2 3 5
  • RPS6_7_1097 3

External Ids for RPS6P15 Gene

ORGUL Members for RPS6P15 Gene

Previous GeneCards Identifiers for RPS6P15 Gene

  • GC10M113249

Summaries for RPS6P15 Gene

GeneCards Summary for RPS6P15 Gene

RPS6P15 (Ribosomal Protein S6 Pseudogene 15) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS6P15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P15 Gene

Genomics for RPS6P15 Gene

Regulatory Elements for RPS6P15 Gene

Enhancers for RPS6P15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H111506 0.2 ENCODE 0.4 -7.5 -7527 0 RPS6P15 LOC105378486
GH10H111757 0.8 ENCODE 0.1 -257.7 -257716 0 GTF2F1 CTCF TFAP4 MAX CEBPG ZNF644 RAD21 SCRT2 SMC3 ZNF143 RPS6P15 LOC105378486
GH10H111507 0.2 ENCODE 0.4 -8.0 -8032 0 RPS6P15 LOC105378486
GH10H111756 0.8 ENCODE 0.1 -258.0 -257957 0 GTF2F1 CTCF TFAP4 MAX RAD21 SCRT2 ZNF143 RCOR1 THAP11 GATAD2A RPS6P15 LOC105378486
GH10H111598 0.6 Ensembl 0.1 -99.6 -99561 0 CTCF ZNF654 TRIM22 MIER2 RAD21 YY1 NFIL3 ZNF143 SMC3 RPS6P15 LOC105378486
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS6P15 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS6P15 Gene

Chromosome:
10
Start:
111,498,176 bp from pter
End:
111,498,941 bp from pter
Size:
766 bases
Orientation:
Minus strand

Genomic View for RPS6P15 Gene

Genes around RPS6P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P15 Gene

Proteins for RPS6P15 Gene

Post-translational modifications for RPS6P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P15 Gene

Domains & Families for RPS6P15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P15 Gene

Function for RPS6P15 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS6P15
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P15 Gene

Localization for RPS6P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6P15 Gene

Pathways & Interactions for RPS6P15 Gene

SuperPathways for RPS6P15 Gene

No Data Available

Interacting Proteins for RPS6P15 Gene

Gene Ontology (GO) - Biological Process for RPS6P15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6P15 Gene

Drugs & Compounds for RPS6P15 Gene

No Compound Related Data Available

Transcripts for RPS6P15 Gene

mRNA/cDNA for RPS6P15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS6P15
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P15 Gene

No ASD Table

Relevant External Links for RPS6P15 Gene

GeneLoc Exon Structure for
RPS6P15
ECgene alternative splicing isoforms for
RPS6P15

Expression for RPS6P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P15 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS6P15 Gene:

RPS6P15
genes like me logo Genes that share expression patterns with RPS6P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P15 Gene

Orthologs for RPS6P15 Gene

Evolution for RPS6P15 Gene

ENSEMBL:
Gene Tree for RPS6P15 (if available)
TreeFam:
Gene Tree for RPS6P15 (if available)

No data available for Orthologs for RPS6P15 Gene

Paralogs for RPS6P15 Gene

No data available for Paralogs for RPS6P15 Gene

Variants for RPS6P15 Gene

Relevant External Links for RPS6P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P15 Gene

Disorders for RPS6P15 Gene

Relevant External Links for RPS6P15

Genetic Association Database (GAD)
RPS6P15

No disorders were found for RPS6P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P15 Gene

Publications for RPS6P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose. (PMID: 19875614) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Diabetes 2010) 45 60
  3. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 45 60
  4. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 45 60

Products for RPS6P15 Gene

Sources for RPS6P15 Gene

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