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Aliases for RPS6KA2-AS1 Gene

Subcategory (RNA class) for RPS6KA2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RPS6KA2-AS1 Gene

  • RPS6KA2 Antisense RNA 1 2 3 5
  • RPS6KA2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for RPS6KA2-AS1 Gene

Previous GeneCards Identifiers for RPS6KA2-AS1 Gene

  • GC06P167318

Summaries for RPS6KA2-AS1 Gene

GeneCards Summary for RPS6KA2-AS1 Gene

RPS6KA2-AS1 (RPS6KA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6KA2-AS1 Gene

Genomics for RPS6KA2-AS1 Gene

Regulatory Elements for RPS6KA2-AS1 Gene

Enhancers for RPS6KA2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around RPS6KA2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS6KA2-AS1 Gene

Chromosome:
6
Start:
166,903,698 bp from pter
End:
166,905,069 bp from pter
Size:
1,372 bases
Orientation:
Plus strand

Genomic View for RPS6KA2-AS1 Gene

Genes around RPS6KA2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6KA2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6KA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6KA2-AS1 Gene

Proteins for RPS6KA2-AS1 Gene

Post-translational modifications for RPS6KA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6KA2-AS1 Gene

Domains & Families for RPS6KA2-AS1 Gene

Gene Families for RPS6KA2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RPS6KA2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6KA2-AS1 Gene

Function for RPS6KA2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6KA2-AS1 Gene

Localization for RPS6KA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS6KA2-AS1 Gene

Pathways & Interactions for RPS6KA2-AS1 Gene

SuperPathways for RPS6KA2-AS1 Gene

No Data Available

Interacting Proteins for RPS6KA2-AS1 Gene

Gene Ontology (GO) - Biological Process for RPS6KA2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6KA2-AS1 Gene

Drugs & Compounds for RPS6KA2-AS1 Gene

No Compound Related Data Available

Transcripts for RPS6KA2-AS1 Gene

mRNA/cDNA for RPS6KA2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6KA2-AS1 Gene

No ASD Table

Relevant External Links for RPS6KA2-AS1 Gene

GeneLoc Exon Structure for
RPS6KA2-AS1
ECgene alternative splicing isoforms for
RPS6KA2-AS1

Expression for RPS6KA2-AS1 Gene

mRNA expression in normal human tissues for RPS6KA2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RPS6KA2-AS1 Gene

This gene is overexpressed in Testis (x44.6).
genes like me logo Genes that share expression patterns with RPS6KA2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS6KA2-AS1 Gene

Orthologs for RPS6KA2-AS1 Gene

Evolution for RPS6KA2-AS1 Gene

ENSEMBL:
Gene Tree for RPS6KA2-AS1 (if available)
TreeFam:
Gene Tree for RPS6KA2-AS1 (if available)

No data available for Orthologs for RPS6KA2-AS1 Gene

Paralogs for RPS6KA2-AS1 Gene

No data available for Paralogs for RPS6KA2-AS1 Gene

Variants for RPS6KA2-AS1 Gene

Sequence variations from dbSNP and Humsavar for RPS6KA2-AS1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs9356540 -- 166,904,363(+) GGGCA(A/G)CTTTG nc-transcript-variant
rs9356541 -- 166,904,426(+) GCTGC(A/G)CGATC nc-transcript-variant
rs73254673 -- 166,903,344(+) CATGC(A/G)GGGCT upstream-variant-2KB
rs73254674 -- 166,905,511(+) GCTGG(C/G)TGGTA downstream-variant-500B
rs143017765 -- 166,903,797(+) AGAAC(C/T)GGAGC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPS6KA2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv11053n54 CNV loss 21841781
nsv605260 CNV gain 21841781
nsv605333 CNV loss 21841781
nsv823929 CNV gain 20364138
nsv949891 CNV deletion 24416366

Relevant External Links for RPS6KA2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6KA2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPS6KA2-AS1 Gene

Disorders for RPS6KA2-AS1 Gene

Relevant External Links for RPS6KA2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPS6KA2-AS1

No disorders were found for RPS6KA2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6KA2-AS1 Gene

Publications for RPS6KA2-AS1 Gene

  1. In silico prediction and experimental validation of natural antisense transcripts in two cancer-associated regions of human chromosome 6. (PMID: 19287968) Monti L. … Acquati F. (Int. J. Oncol. 2009) 2 3 65

Products for RPS6KA2-AS1 Gene

Sources for RPS6KA2-AS1 Gene

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