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Aliases for RPS6KA2-AS1 Gene

Subcategory (RNA class) for RPS6KA2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for RPS6KA2-AS1 Gene

  • RPS6KA2 Antisense RNA 1 2 3 5
  • RPS6KA2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for RPS6KA2-AS1 Gene

Previous GeneCards Identifiers for RPS6KA2-AS1 Gene

  • GC06P167318

Summaries for RPS6KA2-AS1 Gene

GeneCards Summary for RPS6KA2-AS1 Gene

RPS6KA2-AS1 (RPS6KA2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RPS6KA2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6KA2-AS1 Gene

Genomics for RPS6KA2-AS1 Gene

GeneHancer (GH) Regulatory Elements for RPS6KA2-AS1 Gene

Promoters and enhancers for RPS6KA2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I166862 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 12 -41.0 -41027 0.9 CTCF USF1 ZNF777 RAD21 ZNF335 GLIS2 PATZ1 VEZF1 ZNF600 ZBTB20 RPS6KA2 RPS6KA2-AS1 LOC105378120 FGFR1OP GPR31 GC06P166871 GC06M166790 ENSG00000249141 LOC645468
GH06I167150 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 10 +248.8 248842 3.4 PKNOX1 SMAD1 BATF KLF5 IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 GPR31 RNASET2 CCR6 FGFR1OP LOC105378120 ENSG00000249141 UNC93A RPS6KA2 RPS6KA2-AS1 AFDN
GH06I167129 Enhancer 1.1 ENCODE dbSUPER 9.7 +226.9 226853 2.7 PKNOX1 FOXA2 MLX ARID4B ZNF48 ETS1 TCF12 SLC30A9 ATF7 FOS FGFR1OP LOC105378120 GPR31 RPS6KA2-AS1 RPS6KA2 RNASET2 LOC105378122 CCR6 TCP10L2 LOC105378124
GH06I166926 Enhancer 0.8 dbSUPER 12.2 +28.4 28429 11 HDGF PKNOX1 ZSCAN4 GLIS2 ARID2 ZNF207 EGR2 PAF1 NFIC ZNF184 RNASET2 ENSG00000249141 RPS6KA2 RPS6KA2-AS1 FGFR1OP LOC105378120 GC06M166944 GC06M166790
GH06I166829 Enhancer 0.7 ENCODE 11 -73.0 -72981 2 BATF IRF4 RELA POLR2A ATF7 ETV6 IKZF2 RUNX3 TRIM22 DPF2 RNASET2 ENSG00000249141 RPS6KA2-AS1 RPS6KA2 CCR6 GC06P166871 GC06M166790 LOC645468
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS6KA2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS6KA2-AS1 Gene

Genomic Locations for RPS6KA2-AS1 Gene
1,372 bases
Plus strand

Genomic View for RPS6KA2-AS1 Gene

Genes around RPS6KA2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6KA2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6KA2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6KA2-AS1 Gene

Proteins for RPS6KA2-AS1 Gene

Post-translational modifications for RPS6KA2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6KA2-AS1 Gene

Domains & Families for RPS6KA2-AS1 Gene

Gene Families for RPS6KA2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RPS6KA2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6KA2-AS1 Gene

Function for RPS6KA2-AS1 Gene

Phenotypes From GWAS Catalog for RPS6KA2-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6KA2-AS1 Gene

Localization for RPS6KA2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6KA2-AS1 Gene

Pathways & Interactions for RPS6KA2-AS1 Gene

SuperPathways for RPS6KA2-AS1 Gene

No Data Available

Interacting Proteins for RPS6KA2-AS1 Gene

Gene Ontology (GO) - Biological Process for RPS6KA2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS6KA2-AS1 Gene

Drugs & Compounds for RPS6KA2-AS1 Gene

No Compound Related Data Available

Transcripts for RPS6KA2-AS1 Gene

mRNA/cDNA for RPS6KA2-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6KA2-AS1 Gene

No ASD Table

Relevant External Links for RPS6KA2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS6KA2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6KA2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RPS6KA2-AS1 Gene

This gene is overexpressed in Testis (x44.6).
genes like me logo Genes that share expression patterns with RPS6KA2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6KA2-AS1 Gene

Orthologs for RPS6KA2-AS1 Gene

Evolution for RPS6KA2-AS1 Gene

Gene Tree for RPS6KA2-AS1 (if available)
Gene Tree for RPS6KA2-AS1 (if available)

No data available for Orthologs for RPS6KA2-AS1 Gene

Paralogs for RPS6KA2-AS1 Gene

No data available for Paralogs for RPS6KA2-AS1 Gene

Variants for RPS6KA2-AS1 Gene

Sequence variations from dbSNP and Humsavar for RPS6KA2-AS1 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1001333043 -- 166,903,674(+) A/ upstream_transcript_variant
rs1002342982 -- 166,901,928(+) C/T upstream_transcript_variant
rs1002345156 -- 166,902,353(+) G/A upstream_transcript_variant
rs1002395119 -- 166,901,753(+) C/T upstream_transcript_variant
rs1002605708 -- 166,904,288(+) A/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for RPS6KA2-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv11053n54 CNV loss 21841781
nsv605260 CNV gain 21841781
nsv605333 CNV loss 21841781
nsv823929 CNV gain 20364138
nsv949891 CNV deletion 24416366

Additional Variant Information for RPS6KA2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPS6KA2-AS1 Gene

Disorders for RPS6KA2-AS1 Gene

Additional Disease Information for RPS6KA2-AS1

No disorders were found for RPS6KA2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6KA2-AS1 Gene

Publications for RPS6KA2-AS1 Gene

  1. In silico prediction and experimental validation of natural antisense transcripts in two cancer-associated regions of human chromosome 6. (PMID: 19287968) Monti L … Acquati F (International journal of oncology 2009) 2 3 58

Products for RPS6KA2-AS1 Gene

Sources for RPS6KA2-AS1 Gene

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