Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS5P3 Gene

Aliases for RPS5P3 Gene

  • Ribosomal Protein S5 Pseudogene 3 2 3 5
  • Ribosomal Protein S5-Like 2
  • RPS5_3_1726 3
  • RPS5L 3

External Ids for RPS5P3 Gene

Previous HGNC Symbols for RPS5P3 Gene

  • RPS5L

Previous GeneCards Identifiers for RPS5P3 Gene

  • GC21P033776
  • GC21M034855
  • GC21M034856

Summaries for RPS5P3 Gene

GeneCards Summary for RPS5P3 Gene

RPS5P3 (Ribosomal Protein S5 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS5P3 Gene

Genomics for RPS5P3 Gene

Regulatory Elements for RPS5P3 Gene

Enhancers for RPS5P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F033400 1.5 FANTOM5 ENCODE 10.5 +78.3 78313 6.7 CREB3L1 MLX WRNIP1 ARID4B SIN3A ZNF2 YY1 FOS ZNF263 SP3 IFNGR2 TMEM50B IFNAR2 C21orf140 RPS5P3 ENSG00000231355 ENSG00000249624 DNAJC28 IL10RB GART
GH21F033201 1.6 FANTOM5 Ensembl ENCODE 9.5 +277.3 277317 6.5 HDGF PKNOX1 ZFP64 SIN3A DMAP1 ZNF48 YY1 ZNF548 FOS MCM3 EVA1C IFNAR2 IFNGR2 OLIG2 ENSG00000249624 LINC01548 ENSG00000226433 OLIG1 DNAJC28 ENSG00000231355
GH21F033432 1.2 Ensembl ENCODE 12.2 +48.0 47980 3.0 HDGF TBP PKNOX1 TBL1XR1 WRNIP1 SIN3A ZBTB40 ZNF121 ETV6 RCOR1 TMEM50B RPS5P3 IFNAR2 DNAJC28 LINC01548 IFNGR2
GH21F033392 1.4 FANTOM5 Ensembl ENCODE 10.2 +87.1 87062 6.4 ZNF211 MAX CEBPG ZIC2 RARA FOSL1 ZNF316 SCRT2 NR2F6 TRIM24 IFNGR2 TMEM50B IFNAR2 ENSG00000249624 RPS5P3 ENSG00000231355 DNAJC28 LINC01548 IL10RB IFNAR1
GH21F033539 1.2 ENCODE 11.3 -60.7 -60746 6.5 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 TMEM50B RPS5P2 DNAJC28 ENSG00000231355 RPS5P3 C21orf140 GART SON MIR6501
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS5P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS5P3 Gene

Chromosome:
21
Start:
33,481,539 bp from pter
End:
33,482,262 bp from pter
Size:
724 bases
Orientation:
Minus strand

Genomic View for RPS5P3 Gene

Genes around RPS5P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS5P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS5P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS5P3 Gene

Proteins for RPS5P3 Gene

Post-translational modifications for RPS5P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS5P3 Gene

Domains & Families for RPS5P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS5P3 Gene

Function for RPS5P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS5P3 Gene

Localization for RPS5P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS5P3 Gene

Pathways & Interactions for RPS5P3 Gene

SuperPathways for RPS5P3 Gene

No Data Available

Interacting Proteins for RPS5P3 Gene

Gene Ontology (GO) - Biological Process for RPS5P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS5P3 Gene

Transcripts for RPS5P3 Gene

mRNA/cDNA for RPS5P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS5P3 Gene

No ASD Table

Relevant External Links for RPS5P3 Gene

GeneLoc Exon Structure for
RPS5P3
ECgene alternative splicing isoforms for
RPS5P3

Expression for RPS5P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS5P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS5P3 Gene:

RPS5P3
genes like me logo Genes that share expression patterns with RPS5P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS5P3 Gene

Orthologs for RPS5P3 Gene

Evolution for RPS5P3 Gene

ENSEMBL:
Gene Tree for RPS5P3 (if available)
TreeFam:
Gene Tree for RPS5P3 (if available)

No data available for Orthologs for RPS5P3 Gene

Paralogs for RPS5P3 Gene

No data available for Paralogs for RPS5P3 Gene

Variants for RPS5P3 Gene

Relevant External Links for RPS5P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS5P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS5P3 Gene

Disorders for RPS5P3 Gene

No disorders were found for RPS5P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS5P3 Gene

Publications for RPS5P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64

Products for RPS5P3 Gene

Sources for RPS5P3 Gene

Content
Loading form....