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Aliases for RPS5P2 Gene

Aliases for RPS5P2 Gene

  • Ribosomal Protein S5 Pseudogene 2 2 3 5
  • RPS5_4_1727 3

External Ids for RPS5P2 Gene

Previous GeneCards Identifiers for RPS5P2 Gene

  • GC00U913204
  • GC21U900124
  • GC21M034429
  • GC21M035508
  • GC21M020986

Summaries for RPS5P2 Gene

GeneCards Summary for RPS5P2 Gene

RPS5P2 (Ribosomal Protein S5 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS5P2 Gene

Genomics for RPS5P2 Gene

Regulatory Elements for RPS5P2 Gene

Enhancers for RPS5P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F033323 1.1 ENCODE 20.6 +811.0 810952 2.4 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 EVA1C RPS5P2 LINC01548 ENSG00000226433 ENSG00000238220 OR7E23P IFNAR1 CRYZL1 TCP10L IFNAR2
GH21F034029 1.1 FANTOM5 Ensembl ENCODE 13.9 +106.0 105988 0.9 PKNOX1 ATF1 CREB3L1 ETS1 ELK1 ZNF143 FOS SP3 NFYC JUNB RPS5P2 MRPS6 SLC5A3 ENSG00000214955 LINC00649 GART LOC105372789
GH21F034373 0.9 ENCODE 13.9 -238.9 -238922 4.0 HDGF CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF207 ZNF143 FOS SP3 RPS5P2 SMIM11A LOC105372791 KCNE2
GH21F033966 1.2 Ensembl ENCODE 13.9 +166.5 166528 6.4 ATF1 PKNOX1 ARNT CREB3L1 SIN3A FEZF1 DMAP1 ZNF2 ETS1 YY1 LINC00649 ATP5O RPS5P2 C21orf140 SLC5A3 MRPS6 ENSG00000214955 GC21M033955 LOC105372788
GH21F033913 0.2 ENCODE 13.9 +220.7 220747 3.0 ATF1 CREB3L1 ARID4B SIN3A ZNF48 ETS1 YY1 SLC30A9 ELK1 ZNF207 ATP5O RPS5P2 OLIG2 OLIG1 LINC00649 PIR61544
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS5P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS5P2 Gene

Chromosome:
21
Start:
34,135,382 bp from pter
End:
34,136,128 bp from pter
Size:
747 bases
Orientation:
Minus strand

Genomic View for RPS5P2 Gene

Genes around RPS5P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS5P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS5P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS5P2 Gene

Proteins for RPS5P2 Gene

Post-translational modifications for RPS5P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS5P2 Gene

Domains & Families for RPS5P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS5P2 Gene

Function for RPS5P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS5P2 Gene

Localization for RPS5P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS5P2 Gene

Pathways & Interactions for RPS5P2 Gene

SuperPathways for RPS5P2 Gene

No Data Available

Interacting Proteins for RPS5P2 Gene

Gene Ontology (GO) - Biological Process for RPS5P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS5P2 Gene

Transcripts for RPS5P2 Gene

mRNA/cDNA for RPS5P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS5P2 Gene

No ASD Table

Relevant External Links for RPS5P2 Gene

GeneLoc Exon Structure for
RPS5P2
ECgene alternative splicing isoforms for
RPS5P2

Expression for RPS5P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS5P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS5P2 Gene:

RPS5P2
genes like me logo Genes that share expression patterns with RPS5P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS5P2 Gene

Orthologs for RPS5P2 Gene

Evolution for RPS5P2 Gene

ENSEMBL:
Gene Tree for RPS5P2 (if available)
TreeFam:
Gene Tree for RPS5P2 (if available)

No data available for Orthologs for RPS5P2 Gene

Paralogs for RPS5P2 Gene

No data available for Paralogs for RPS5P2 Gene

Variants for RPS5P2 Gene

Relevant External Links for RPS5P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS5P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS5P2 Gene

Disorders for RPS5P2 Gene

No disorders were found for RPS5P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS5P2 Gene

Publications for RPS5P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS5P2 Gene

Sources for RPS5P2 Gene

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