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Aliases for RPS5P2 Gene

Aliases for RPS5P2 Gene

  • Ribosomal Protein S5 Pseudogene 2 2 3 5
  • RPS5_4_1727 3

External Ids for RPS5P2 Gene

Previous GeneCards Identifiers for RPS5P2 Gene

  • GC00U913204
  • GC21U900124
  • GC21M034429
  • GC21M035508
  • GC21M020986

Summaries for RPS5P2 Gene

GeneCards Summary for RPS5P2 Gene

RPS5P2 (Ribosomal Protein S5 Pseudogene 2) is a Pseudogene.

Additional gene information for RPS5P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS5P2 Gene

Genomics for RPS5P2 Gene

GeneHancer (GH) Regulatory Elements for RPS5P2 Gene

Promoters and enhancers for RPS5P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I033323 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.1 +811.0 811048 2.6 DMAP1 YY1 ZNF213 E2F8 ZNF416 ZNF143 ZNF548 SP3 PPARGC1A MEF2D IFNAR1 PAXBP1 TMEM50B SON EVA1C C21orf59 GART CRYZL1 PAXBP1-AS1 DONSON
GH21I033490 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.7 +644.5 644471 1.5 HDGF PKNOX1 CLOCK SMAD1 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 DNAJC28 SON PAXBP1 TMEM50B GART DONSON RPS5P2 SMIM34A ENSG00000231355
GH21I033201 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +932.2 932166 4.5 HDGF PKNOX1 SMAD1 SIN3A DMAP1 ZNF48 YY1 ATF7 ZNF548 FOS SON PAXBP1 TMEM50B EVA1C GART DONSON IFNAR2 IFNGR2 URB1 C21orf59
GH21I034843 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -709.2 -709198 4.2 SIN3A FEZF1 ZNF2 IRF4 ZNF213 ZNF207 FOS JUNB ZFP41 ZSCAN16 C21orf140 RPS5P2 KCNE1 LOC102724584 GC21M034865 PIR39931
GH21I034992 Enhancer 1.1 Ensembl dbSUPER 10.1 -857.2 -857173 1.4 HDAC1 YBX3 HDGF NFRKB ZSCAN4 ZNF195 NFXL1 TCF12 ZNF280A ARID2 RPS5P2 RUNX1-IT1 GC21P034943
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS5P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS5P2 Gene

Genomic Locations for RPS5P2 Gene
chr21:34,135,382-34,136,128
(GRCh38/hg38)
Size:
747 bases
Orientation:
Minus strand
chr21:35,507,682-35,508,428
(GRCh37/hg19)

Genomic View for RPS5P2 Gene

Genes around RPS5P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS5P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS5P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS5P2 Gene

Proteins for RPS5P2 Gene

Post-translational modifications for RPS5P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS5P2 Gene

Domains & Families for RPS5P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS5P2 Gene

Function for RPS5P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS5P2 Gene

Localization for RPS5P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS5P2 Gene

Pathways & Interactions for RPS5P2 Gene

SuperPathways for RPS5P2 Gene

No Data Available

Interacting Proteins for RPS5P2 Gene

Gene Ontology (GO) - Biological Process for RPS5P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS5P2 Gene

Drugs & Compounds for RPS5P2 Gene

No Compound Related Data Available

Transcripts for RPS5P2 Gene

mRNA/cDNA for RPS5P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS5P2 Gene

No ASD Table

Relevant External Links for RPS5P2 Gene

GeneLoc Exon Structure for
RPS5P2
ECgene alternative splicing isoforms for
RPS5P2

Expression for RPS5P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS5P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS5P2 Gene:

RPS5P2
genes like me logo Genes that share expression patterns with RPS5P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS5P2 Gene

Orthologs for RPS5P2 Gene

Evolution for RPS5P2 Gene

ENSEMBL:
Gene Tree for RPS5P2 (if available)
TreeFam:
Gene Tree for RPS5P2 (if available)

No data available for Orthologs for RPS5P2 Gene

Paralogs for RPS5P2 Gene

No data available for Paralogs for RPS5P2 Gene

Variants for RPS5P2 Gene

Additional Variant Information for RPS5P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS5P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS5P2 Gene

Disorders for RPS5P2 Gene

No disorders were found for RPS5P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS5P2 Gene

Publications for RPS5P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS5P2 Gene

Sources for RPS5P2 Gene

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