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Aliases for RPS4Y1P1 Gene

Aliases for RPS4Y1P1 Gene

  • Ribosomal Protein S4Y Pseudogene 1 2 3
  • RPS4Y_1_1499 3
  • RP11-331F4.1 5

External Ids for RPS4Y1P1 Gene

Previous GeneCards Identifiers for RPS4Y1P1 Gene

  • GC16M073784
  • GC16M075227

Summaries for RPS4Y1P1 Gene

GeneCards Summary for RPS4Y1P1 Gene

RPS4Y1P1 (Ribosomal Protein S4Y Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4Y1P1 Gene

Genomics for RPS4Y1P1 Gene

Regulatory Elements for RPS4Y1P1 Gene

Enhancers for RPS4Y1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F075188 0.6 ENCODE 0.8 +4.0 4041 1.3 MAZ ZNF687 RFX1 L3MBTL2 SIN3A DPF2 GATAD2B ZBTB40 RAD21 ZKSCAN1 BCAR1 ENSG00000252122 ZFP1 RPS4Y1P1 GC16P075140
GH16F075198 1.1 Ensembl ENCODE 0.4 -5.1 -5079 0.6 KLF1 NRF1 ZNF133 BCAR1 CTRB1 LOC100506281 ENSG00000252122 CTRB2 ZFP1 RPS4Y1P1
GH16F075199 0.4 ENCODE 0.4 -6.2 -6229 0.2 CTCF SAP130 ARID4B RAD21 ZNF101 RFX5 TEAD3 ZNF121 ZNF143 SMC3 LOC100506281 ENSG00000252122 BCAR1 CTRB2 RPS4Y1P1
GH16F075201 0.2 ENCODE 0.4 -8.2 -8182 0.3 IKZF1 SPI1 BCAR1 LOC100506281 ENSG00000252122 CTRB2 RPS4Y1P1
GH16F075200 0.2 Ensembl 0.4 -6.4 -6412 0.2 CTCF SAP130 ARID4B RAD21 ZNF101 RFX5 TEAD3 ZNF143 SMC3 EGR2 LOC100506281 ENSG00000252122 BCAR1 CTRB2 RPS4Y1P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS4Y1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS4Y1P1 Gene

Chromosome:
16
Start:
75,192,400 bp from pter
End:
75,193,289 bp from pter
Size:
890 bases
Orientation:
Minus strand

Genomic View for RPS4Y1P1 Gene

Genes around RPS4Y1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4Y1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4Y1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4Y1P1 Gene

Proteins for RPS4Y1P1 Gene

Post-translational modifications for RPS4Y1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4Y1P1 Gene

Domains & Families for RPS4Y1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4Y1P1 Gene

Function for RPS4Y1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4Y1P1 Gene

Localization for RPS4Y1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS4Y1P1 Gene

Pathways & Interactions for RPS4Y1P1 Gene

SuperPathways for RPS4Y1P1 Gene

No Data Available

Interacting Proteins for RPS4Y1P1 Gene

Gene Ontology (GO) - Biological Process for RPS4Y1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4Y1P1 Gene

Transcripts for RPS4Y1P1 Gene

mRNA/cDNA for RPS4Y1P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4Y1P1 Gene

No ASD Table

Relevant External Links for RPS4Y1P1 Gene

GeneLoc Exon Structure for
RPS4Y1P1
ECgene alternative splicing isoforms for
RPS4Y1P1

Expression for RPS4Y1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS4Y1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4Y1P1 Gene:

RPS4Y1P1
genes like me logo Genes that share expression patterns with RPS4Y1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS4Y1P1 Gene

Orthologs for RPS4Y1P1 Gene

Evolution for RPS4Y1P1 Gene

ENSEMBL:
Gene Tree for RPS4Y1P1 (if available)
TreeFam:
Gene Tree for RPS4Y1P1 (if available)

No data available for Orthologs for RPS4Y1P1 Gene

Paralogs for RPS4Y1P1 Gene

No data available for Paralogs for RPS4Y1P1 Gene

Variants for RPS4Y1P1 Gene

Relevant External Links for RPS4Y1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4Y1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4Y1P1 Gene

Disorders for RPS4Y1P1 Gene

No disorders were found for RPS4Y1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS4Y1P1 Gene

Publications for RPS4Y1P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS4Y1P1 Gene

Sources for RPS4Y1P1 Gene

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