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Aliases for RPS4XP21 Gene

Aliases for RPS4XP21 Gene

  • Ribosomal Protein S4X Pseudogene 21 2 3 5
  • RPS4X_10_1649 3
  • RPS4P21 3

External Ids for RPS4XP21 Gene

Previous HGNC Symbols for RPS4XP21 Gene

  • RPS4P21

Previous GeneCards Identifiers for RPS4XP21 Gene

  • GC19M034514
  • GC19M034516
  • GC19M034583

Summaries for RPS4XP21 Gene

GeneCards Summary for RPS4XP21 Gene

RPS4XP21 (Ribosomal Protein S4X Pseudogene 21) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4XP21 Gene

Genomics for RPS4XP21 Gene

Regulatory Elements for RPS4XP21 Gene

Enhancers for RPS4XP21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G034096 0.8 ENCODE 0.7 -3.1 -3105 0.2 PKNOX1 ZSCAN4 ZNF76 KLF17 ZNF2 RAD21 ZNF366 ZNF391 MIXL1 ZNF654 RPS4XP21 GC19P034098
GH19G034085 0.7 ENCODE 0.4 +7.8 7801 0.1 ZNF263 KLF1 DPF2 ZIC2 FOXA1 ZNF217 ZNF579 CTBP1 GATA3 KLF9 RPS4XP21 GC19M034035
GH19G034067 0.9 ENCODE 0.3 +25.9 25896 0.2 INSM2 ZNF76 KLF17 GLI4 GLIS2 ZNF366 ZSCAN5C ZNF350 ZNF391 EGR2 GPATCH1 LSM14A GC19M034035 RPS4XP21
GH19G034082 0.5 ENCODE 0.4 +10.5 10496 0.2 ZNF263 TEAD4 NR2F2 RPS4XP21 GC19M034035
GH19G034068 0.6 ENCODE 0.3 +25.2 25216 0.2 ZFHX2 JUND SIN3A ZNF600 KLF4 EGR2 GC19M034035 RPS4XP21
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS4XP21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS4XP21 Gene

Chromosome:
19
Start:
34,092,476 bp from pter
End:
34,093,366 bp from pter
Size:
891 bases
Orientation:
Minus strand

Genomic View for RPS4XP21 Gene

Genes around RPS4XP21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP21 Gene

Proteins for RPS4XP21 Gene

Post-translational modifications for RPS4XP21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP21 Gene

Domains & Families for RPS4XP21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4XP21 Gene

Function for RPS4XP21 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP21 Gene

Localization for RPS4XP21 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for RPS4XP21 gene
Compartment Confidence
cytosol 3
mitochondrion 2
nucleus 1
endoplasmic reticulum 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for RPS4XP21 Gene

Pathways & Interactions for RPS4XP21 Gene

SuperPathways for RPS4XP21 Gene

No Data Available

Interacting Proteins for RPS4XP21 Gene

Gene Ontology (GO) - Biological Process for RPS4XP21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4XP21 Gene

Drugs & Compounds for RPS4XP21 Gene

No Compound Related Data Available

Transcripts for RPS4XP21 Gene

mRNA/cDNA for RPS4XP21 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP21 Gene

No ASD Table

Relevant External Links for RPS4XP21 Gene

GeneLoc Exon Structure for
RPS4XP21
ECgene alternative splicing isoforms for
RPS4XP21

Expression for RPS4XP21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS4XP21 Gene

mRNA differential expression in normal tissues according to GTEx for RPS4XP21 Gene

This gene is overexpressed in Testis (x38.5) and Pituitary (x14.5).

Protein differential expression in normal tissues from HIPED for RPS4XP21 Gene

This gene is overexpressed in Heart (65.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from MaxQB and MOPED for RPS4XP21 Gene



Protein tissue co-expression partners for RPS4XP21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4XP21 Gene:

RPS4XP21
genes like me logo Genes that share expression patterns with RPS4XP21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP21 Gene

Orthologs for RPS4XP21 Gene

Evolution for RPS4XP21 Gene

ENSEMBL:
Gene Tree for RPS4XP21 (if available)
TreeFam:
Gene Tree for RPS4XP21 (if available)

No data available for Orthologs for RPS4XP21 Gene

Paralogs for RPS4XP21 Gene

No data available for Paralogs for RPS4XP21 Gene

Variants for RPS4XP21 Gene

Relevant External Links for RPS4XP21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP21 Gene

Disorders for RPS4XP21 Gene

No disorders were found for RPS4XP21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS4XP21 Gene

Publications for RPS4XP21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS4XP21 Gene

Sources for RPS4XP21 Gene

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