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Aliases for RPS4XP18 Gene

Aliases for RPS4XP18 Gene

  • Ribosomal Protein S4X Pseudogene 18 2 3 5
  • Ribosomal Protein S4, X-Linked Pseudogene 3
  • RPS4X_10_1587 3
  • RPS4P18 3

External Ids for RPS4XP18 Gene

Previous HGNC Symbols for RPS4XP18 Gene

  • RPS4P18

Previous GeneCards Identifiers for RPS4XP18 Gene

  • GC18P020167

Summaries for RPS4XP18 Gene

GeneCards Summary for RPS4XP18 Gene

RPS4XP18 (Ribosomal Protein S4X Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4XP18 Gene

Genomics for RPS4XP18 Gene

Regulatory Elements for RPS4XP18 Gene

Enhancers for RPS4XP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G022556 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -27.6 -27579 5.3 PKNOX1 ATF1 CREB3L1 ARNT SIN3A FEZF1 YY1 TCF12 GATA2 FOS GATA6 RPS4XP18 GC18P022454
GH18G022550 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -34.3 -34315 2.9 TAF1 SMAD5 JUN BHLHE40 CEBPB MAX EP300 YY1 JUND ATF3 ENSG00000264188 RPS4XP18 GC18P022454
GH18G022562 1.4 Ensembl ENCODE dbSUPER 0.3 -22.8 -22842 1.8 PKNOX1 FOXA2 RAD21 RFX5 ZNF766 ZNF366 CREM MIXL1 DEK THAP11 ESCO1 ABHD3 RPS4XP18 GC18P022454
GH18G022580 0.9 ENCODE 0.4 -6.0 -6012 0.2 PKNOX1 ATF1 CBX3 NFRKB ZEB1 CHAMP1 FOS CEBPB ZEB2 ZNF518A RPS4XP18 GC18P022454
GH18G022541 1.1 Ensembl ENCODE dbSUPER 0.3 -44.0 -43955 1.3 MAX RAD21 NR2F2 YY1 JUND ATF3 HNF4G HNF4A RPS4XP18 GC18P022454
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS4XP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS4XP18 Gene

Chromosome:
18
Start:
22,586,404 bp from pter
End:
22,587,278 bp from pter
Size:
875 bases
Orientation:
Plus strand

Genomic View for RPS4XP18 Gene

Genes around RPS4XP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP18 Gene

Proteins for RPS4XP18 Gene

Post-translational modifications for RPS4XP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP18 Gene

Domains & Families for RPS4XP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4XP18 Gene

Function for RPS4XP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP18 Gene

Localization for RPS4XP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS4XP18 Gene

Pathways & Interactions for RPS4XP18 Gene

SuperPathways for RPS4XP18 Gene

No Data Available

Interacting Proteins for RPS4XP18 Gene

Gene Ontology (GO) - Biological Process for RPS4XP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4XP18 Gene

Drugs & Compounds for RPS4XP18 Gene

No Compound Related Data Available

Transcripts for RPS4XP18 Gene

mRNA/cDNA for RPS4XP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP18 Gene

No ASD Table

Relevant External Links for RPS4XP18 Gene

GeneLoc Exon Structure for
RPS4XP18
ECgene alternative splicing isoforms for
RPS4XP18

Expression for RPS4XP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS4XP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4XP18 Gene:

RPS4XP18
genes like me logo Genes that share expression patterns with RPS4XP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP18 Gene

Orthologs for RPS4XP18 Gene

Evolution for RPS4XP18 Gene

ENSEMBL:
Gene Tree for RPS4XP18 (if available)
TreeFam:
Gene Tree for RPS4XP18 (if available)

No data available for Orthologs for RPS4XP18 Gene

Paralogs for RPS4XP18 Gene

No data available for Paralogs for RPS4XP18 Gene

Variants for RPS4XP18 Gene

Relevant External Links for RPS4XP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP18 Gene

Disorders for RPS4XP18 Gene

Relevant External Links for RPS4XP18

Genetic Association Database (GAD)
RPS4XP18

No disorders were found for RPS4XP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS4XP18 Gene

Publications for RPS4XP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study of intracranial aneurysm identifies three new risk loci. (PMID: 20364137) Yasuno K. … GA1nel M. (Nat. Genet. 2010) 46 64
  3. Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2. (PMID: 20694014) Thye T. … Hill A.V. (Nat. Genet. 2010) 46 64

Products for RPS4XP18 Gene

Sources for RPS4XP18 Gene

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