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Aliases for RPS4XP17 Gene

Aliases for RPS4XP17 Gene

  • Ribosomal Protein S4X Pseudogene 17 2 3 5
  • Ribosomal Protein S4, X-Linked Pseudogene 3
  • RPS4X_7_1505 3
  • RPS4P17 3

External Ids for RPS4XP17 Gene

Previous HGNC Symbols for RPS4XP17 Gene

  • RPS4P17

Previous GeneCards Identifiers for RPS4XP17 Gene

  • GC17M000559

Summaries for RPS4XP17 Gene

GeneCards Summary for RPS4XP17 Gene

RPS4XP17 (Ribosomal Protein S4X Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4XP17 Gene

Genomics for RPS4XP17 Gene

Regulatory Elements for RPS4XP17 Gene

Enhancers for RPS4XP17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G001484 1.8 FANTOM5 ENCODE dbSUPER 5.7 -831.1 -831060 9.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 FEZF1 ZNF2 ZBTB7B YY1 PITPNA YWHAE INPP5K MYO1C TUSC5 RPS4XP17 TIMM22 GC17M001482
GH17G000671 0.6 FANTOM5 0.4 -14.0 -13967 0.3 ZNF366 REST PRDM1 VPS53 C17orf97 DOC2B RFLNB GC17M000676 RPS4XP17
GH17G000669 0.5 ENCODE 0.4 -11.5 -11500 0.2 JUND JUN CEBPB FOS VPS53 C17orf97 DOC2B RFLNB GC17M000676 RPS4XP17
GH17G000673 0.5 ENCODE 0.4 -16.3 -16264 1.5 RFX1 POLR2A ZNF341 TEAD4 BMI1 VPS53 C17orf97 DOC2B RFLNB GEMIN4 ENSG00000263015 GC17M000676 RPS4XP17
GH17G000675 0.2 ENCODE 0.4 -18.8 -18789 1.8 VPS53 C17orf97 DOC2B RFLNB GEMIN4 ENSG00000263015 GC17M000676 RPS4XP17
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS4XP17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS4XP17 Gene

Chromosome:
17
Start:
656,732 bp from pter
End:
657,596 bp from pter
Size:
865 bases
Orientation:
Minus strand

Genomic View for RPS4XP17 Gene

Genes around RPS4XP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP17 Gene

Proteins for RPS4XP17 Gene

Post-translational modifications for RPS4XP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP17 Gene

Domains & Families for RPS4XP17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4XP17 Gene

Function for RPS4XP17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP17 Gene

Localization for RPS4XP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS4XP17 Gene

Pathways & Interactions for RPS4XP17 Gene

SuperPathways for RPS4XP17 Gene

No Data Available

Interacting Proteins for RPS4XP17 Gene

Gene Ontology (GO) - Biological Process for RPS4XP17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4XP17 Gene

Drugs & Compounds for RPS4XP17 Gene

No Compound Related Data Available

Transcripts for RPS4XP17 Gene

mRNA/cDNA for RPS4XP17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP17 Gene

No ASD Table

Relevant External Links for RPS4XP17 Gene

GeneLoc Exon Structure for
RPS4XP17
ECgene alternative splicing isoforms for
RPS4XP17

Expression for RPS4XP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS4XP17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4XP17 Gene:

RPS4XP17
genes like me logo Genes that share expression patterns with RPS4XP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP17 Gene

Orthologs for RPS4XP17 Gene

Evolution for RPS4XP17 Gene

ENSEMBL:
Gene Tree for RPS4XP17 (if available)
TreeFam:
Gene Tree for RPS4XP17 (if available)

No data available for Orthologs for RPS4XP17 Gene

Paralogs for RPS4XP17 Gene

No data available for Paralogs for RPS4XP17 Gene

Variants for RPS4XP17 Gene

Relevant External Links for RPS4XP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP17 Gene

Disorders for RPS4XP17 Gene

No disorders were found for RPS4XP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS4XP17 Gene

Publications for RPS4XP17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS4XP17 Gene

Sources for RPS4XP17 Gene

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