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Aliases for RPS4XP13 Gene

Aliases for RPS4XP13 Gene

  • Ribosomal Protein S4X Pseudogene 13 2 3 5
  • Ribosomal Protein S4, X-Linked Pseudogene 3
  • RPS4X_3_1145 3
  • RPS4P13 3

External Ids for RPS4XP13 Gene

Previous HGNC Symbols for RPS4XP13 Gene

  • RPS4P13

Previous GeneCards Identifiers for RPS4XP13 Gene

  • GC11M057345

Summaries for RPS4XP13 Gene

GeneCards Summary for RPS4XP13 Gene

RPS4XP13 (Ribosomal Protein S4X Pseudogene 13) is a Pseudogene.

Additional gene information for RPS4XP13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4XP13 Gene

Genomics for RPS4XP13 Gene

GeneHancer (GH) Regulatory Elements for RPS4XP13 Gene

Promoters and enhancers for RPS4XP13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I057529 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.1 +46.4 46416 2.5 HDGF FOXA2 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 PIR40820 TIMM10 PIR39300 SSRP1 CLP1 MIR130A UBE2L6 RPS4XP13 ENSG00000254602 YPEL4
GH11I057637 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -62.4 -62409 4.5 HDGF FOXA2 ARID4B SIN3A GLI4 ZNF48 YY1 ETS1 SLC30A9 GLIS2 ENSG00000254602 MIR130A UBE2L6 RPS4XP13 SERPING1 MED19 TIMM10 PRG3 YPEL4 OR9Q1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS4XP13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS4XP13 Gene

Genomic Locations for RPS4XP13 Gene
chr11:57,576,229-57,577,105
(GRCh38/hg38)
Size:
877 bases
Orientation:
Minus strand
chr11:57,343,702-57,344,578
(GRCh37/hg19)

Genomic View for RPS4XP13 Gene

Genes around RPS4XP13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP13 Gene

Proteins for RPS4XP13 Gene

Post-translational modifications for RPS4XP13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP13 Gene

Domains & Families for RPS4XP13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4XP13 Gene

Function for RPS4XP13 Gene

Phenotypes From GWAS Catalog for RPS4XP13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP13 Gene

Localization for RPS4XP13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS4XP13 Gene

Pathways & Interactions for RPS4XP13 Gene

SuperPathways for RPS4XP13 Gene

No Data Available

Interacting Proteins for RPS4XP13 Gene

Gene Ontology (GO) - Biological Process for RPS4XP13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4XP13 Gene

Drugs & Compounds for RPS4XP13 Gene

No Compound Related Data Available

Transcripts for RPS4XP13 Gene

mRNA/cDNA for RPS4XP13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP13 Gene

No ASD Table

Relevant External Links for RPS4XP13 Gene

GeneLoc Exon Structure for
RPS4XP13
ECgene alternative splicing isoforms for
RPS4XP13

Expression for RPS4XP13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS4XP13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4XP13 Gene:

RPS4XP13
genes like me logo Genes that share expression patterns with RPS4XP13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP13 Gene

Orthologs for RPS4XP13 Gene

Evolution for RPS4XP13 Gene

ENSEMBL:
Gene Tree for RPS4XP13 (if available)
TreeFam:
Gene Tree for RPS4XP13 (if available)

No data available for Orthologs for RPS4XP13 Gene

Paralogs for RPS4XP13 Gene

No data available for Paralogs for RPS4XP13 Gene

Variants for RPS4XP13 Gene

Additional Variant Information for RPS4XP13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP13 Gene

Disorders for RPS4XP13 Gene

Additional Disease Information for RPS4XP13

Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for RPS4XP13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS4XP13 Gene

Publications for RPS4XP13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Risk of meningioma and common variation in genes related to innate immunity. (PMID: 20406964) Rajaraman P … Inskip PD (Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2010) 3 58
  3. Polymorphisms in innate immunity genes and risk of childhood leukemia. (PMID: 20438785) Han S … Kang D (Human immunology 2010) 3 58
  4. Common variation in genes related to innate immunity and risk of adult glioma. (PMID: 19423540) Rajaraman P … Chanock SJ (Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2009) 3 58

Products for RPS4XP13 Gene

Sources for RPS4XP13 Gene

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