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Aliases for RPS3P7 Gene

Aliases for RPS3P7 Gene

  • Ribosomal Protein S3 Pseudogene 7 2 3 5
  • RPS3_3_1501 3

External Ids for RPS3P7 Gene

Previous GeneCards Identifiers for RPS3P7 Gene

  • GC16U900953
  • GC16P078860

Summaries for RPS3P7 Gene

GeneCards Summary for RPS3P7 Gene

RPS3P7 (Ribosomal Protein S3 Pseudogene 7) is a Pseudogene.

Additional gene information for RPS3P7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3P7 Gene

Genomics for RPS3P7 Gene

Regulatory Elements for RPS3P7 Gene

Enhancers for RPS3P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H078793 1.4 FANTOM5 Ensembl ENCODE 0.3 -29.8 -29788 3 ATF1 ZBTB40 ETS1 ZNF143 FOS ATF7 CREM THAP11 HCFC1 MXD4 RPS3P7 ENSG00000279129
GH16H078798 1.2 VISTA 0.3 -26.3 -26261 1 RPS3P7 ENSG00000279129
GH16H078741 1.5 FANTOM5 Ensembl ENCODE 0.2 -82.5 -82533 2 SIN3A ZBTB40 BATF RFX5 TCF12 ZNF766 GATA2 ATF7 RUNX3 CREM RPS3P7 ENSG00000279129
GH16H078817 0.6 ENCODE 0.4 -7.8 -7764 1 FOXA2 FOXA1 NR2F2 YY1 JUND ATF3 HNF4G HNF4A RPS3P7 ENSG00000279129
GH16H078770 1.2 ENCODE dbSUPER 0.2 -54.4 -54382 0 ELF3 RB1 ARID4B ZSCAN9 RAD21 SLC30A9 GLIS2 EGR1 ZNF143 CREM RPS3P7 ENSG00000279129
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3P7 Gene

Chromosome:
16
Start:
78,825,252 bp from pter
End:
78,826,085 bp from pter
Size:
834 bases
Orientation:
Plus strand

Genomic View for RPS3P7 Gene

Genes around RPS3P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3P7 Gene

Proteins for RPS3P7 Gene

Post-translational modifications for RPS3P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3P7 Gene

Domains & Families for RPS3P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3P7 Gene

Function for RPS3P7 Gene

Phenotypes From GWAS Catalog for RPS3P7 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3P7
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3P7 Gene

Localization for RPS3P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3P7 Gene

Pathways & Interactions for RPS3P7 Gene

SuperPathways for RPS3P7 Gene

No Data Available

Interacting Proteins for RPS3P7 Gene

Gene Ontology (GO) - Biological Process for RPS3P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3P7 Gene

Drugs & Compounds for RPS3P7 Gene

No Compound Related Data Available

Transcripts for RPS3P7 Gene

mRNA/cDNA for RPS3P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3P7
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3P7 Gene

No ASD Table

Relevant External Links for RPS3P7 Gene

GeneLoc Exon Structure for
RPS3P7
ECgene alternative splicing isoforms for
RPS3P7

Expression for RPS3P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3P7 Gene

mRNA differential expression in normal tissues according to GTEx for RPS3P7 Gene

This gene is overexpressed in Minor Salivary Gland (x14.6), Cervix - Endocervix (x4.2), and Brain - Cerebellum (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPS3P7 Gene:

RPS3P7
genes like me logo Genes that share expression patterns with RPS3P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3P7 Gene

Orthologs for RPS3P7 Gene

Evolution for RPS3P7 Gene

ENSEMBL:
Gene Tree for RPS3P7 (if available)
TreeFam:
Gene Tree for RPS3P7 (if available)

No data available for Orthologs for RPS3P7 Gene

Paralogs for RPS3P7 Gene

No data available for Paralogs for RPS3P7 Gene

Variants for RPS3P7 Gene

Relevant External Links for RPS3P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3P7 Gene

Disorders for RPS3P7 Gene

Relevant External Links for RPS3P7

Genetic Association Database (GAD)
RPS3P7

No disorders were found for RPS3P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3P7 Gene

Publications for RPS3P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Meta-analysis of genome-wide association studies identifies eight new loci for type 2 diabetes in east Asians. (PMID: 22158537) Cho YS … Seielstad M (Nature genetics 2011) 45 60
  3. Genetic variants that affect length/height in infancy/early childhood in Vietnamese-Korean families. (PMID: 20668459) Kim HN … Kim HL (Journal of human genetics 2010) 45 60
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  5. Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study. (PMID: 17903306) Newton-Cheh C … Larson MG (BMC medical genetics 2007) 45 60

Products for RPS3P7 Gene

Sources for RPS3P7 Gene

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