Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS3P5 Gene

Aliases for RPS3P5 Gene

  • Ribosomal Protein S3 Pseudogene 5 2 3
  • RPS3_2_726 3
  • AL137784.1 5

External Ids for RPS3P5 Gene

Previous GeneCards Identifiers for RPS3P5 Gene

  • GC06P100132
  • GC06P100024

Summaries for RPS3P5 Gene

GeneCards Summary for RPS3P5 Gene

RPS3P5 (Ribosomal Protein S3 Pseudogene 5) is a Pseudogene.

Additional gene information for RPS3P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3P5 Gene

Genomics for RPS3P5 Gene

Regulatory Elements for RPS3P5 Gene

Enhancers for RPS3P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H099514 1.1 ENCODE 44.5 -60.3 -60303 2 HDGF ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SP3 SP5 MXD4 RPS3P5 PNISR LOC101927365 MCHR2-AS1 NPM1P38 PRDX2P4 LOC102724406 CCNC USP45 ENSG00000272017
GH06H099566 1.2 ENCODE 39 -7.6 -7615 2 MLX DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A SSRP1 ZNF610 ZNF585B LOC101927365 RPS3P5 PNISR USP45 FBXL4 MCHR2-AS1 NPM1P38 PRDX2P4 LOC102724406 TSTD3
GH06H099520 1.1 ENCODE 34.1 -54.0 -53986 2 HDGF ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 FOS SP3 MXD4 RPS3P5 LOC101927365 TSTD3 USP45
GH06H099588 0.9 ENCODE 36.5 +13.1 13080 0 TBL1XR1 ZSCAN4 INSM2 KLF17 ZNF2 RAD21 ZNF366 SCRT2 ZNF143 KLF11 RPS3P5 GC06M099587 PRDM13
GH06H099423 1.4 ENCODE dbSUPER 22.1 -150.3 -150270 4 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 LOC101927365 RPS3P5 NPM1P38 MCHR2-AS1 PRDX2P4 LOC102724406 PNISR PIR60353
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3P5 Gene

Chromosome:
6
Start:
99,575,682 bp from pter
End:
99,576,532 bp from pter
Size:
851 bases
Orientation:
Plus strand

Genomic View for RPS3P5 Gene

Genes around RPS3P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3P5 Gene

Proteins for RPS3P5 Gene

Post-translational modifications for RPS3P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3P5 Gene

Domains & Families for RPS3P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3P5 Gene

Function for RPS3P5 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3P5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3P5 Gene

Localization for RPS3P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3P5 Gene

Pathways & Interactions for RPS3P5 Gene

SuperPathways for RPS3P5 Gene

No Data Available

Interacting Proteins for RPS3P5 Gene

Gene Ontology (GO) - Biological Process for RPS3P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3P5 Gene

Drugs & Compounds for RPS3P5 Gene

No Compound Related Data Available

Transcripts for RPS3P5 Gene

mRNA/cDNA for RPS3P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3P5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3P5 Gene

No ASD Table

Relevant External Links for RPS3P5 Gene

GeneLoc Exon Structure for
RPS3P5
ECgene alternative splicing isoforms for
RPS3P5

Expression for RPS3P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3P5 Gene:

RPS3P5
genes like me logo Genes that share expression patterns with RPS3P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3P5 Gene

Orthologs for RPS3P5 Gene

Evolution for RPS3P5 Gene

ENSEMBL:
Gene Tree for RPS3P5 (if available)
TreeFam:
Gene Tree for RPS3P5 (if available)

No data available for Orthologs for RPS3P5 Gene

Paralogs for RPS3P5 Gene

No data available for Paralogs for RPS3P5 Gene

Variants for RPS3P5 Gene

Relevant External Links for RPS3P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3P5 Gene

Disorders for RPS3P5 Gene

No disorders were found for RPS3P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3P5 Gene

Publications for RPS3P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS3P5 Gene

Sources for RPS3P5 Gene

Content
Loading form....