Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS3AP8 Gene

Subcategory (RNA class) for RPS3AP8 Gene

antisense

Aliases for RPS3AP8 Gene

  • Ribosomal Protein S3a Pseudogene 8 2 3
  • RPS3A_3_138 3
  • AL356981.1 5

External Ids for RPS3AP8 Gene

ORGUL Members for RPS3AP8 Gene

Previous GeneCards Identifiers for RPS3AP8 Gene

  • GC01U902366

Summaries for RPS3AP8 Gene

GeneCards Summary for RPS3AP8 Gene

RPS3AP8 (Ribosomal Protein S3a Pseudogene 8) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS3AP8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP8 Gene

Genomics for RPS3AP8 Gene

Regulatory Elements for RPS3AP8 Gene

Enhancers for RPS3AP8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H183267 1.1 Ensembl ENCODE dbSUPER 0.7 +1.9 1872 1 ZNF664 ZFHX2 CEBPB FOS RAD21 MAFK LAMC2 RPS3AP8 NMNAT2
GH01H183277 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.3 14342 6 BATF ZNF2 RAD21 ZNF143 FOS RUNX3 IKZF2 DEK ZNF654 USF2 LOC100271717 SHCBP1L LAMC2 NCF2 ARPC5 LAMC1 RPS3AP8 NMNAT2
GH01H183270 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.7 5747 4 FEZF1 RFX5 ZNF366 ATF7 RUNX3 IKZF2 SMARCC1 NFYA ZC3H11A ZEB2 RNU6-41P LAMC2 LAMC1 RPS3AP8 NMNAT2
GH01H183233 1.3 Ensembl ENCODE 0.3 -31.0 -31003 3 HDGF FEZF1 ZNF2 GTF3C2 ZNF121 ZNF766 GLIS2 ZNF143 FOS REST LAMC2 HMGN1P4 DHX9 LOC100271717 SHCBP1L SMG7 RNU6-41P RPS3AP8
GH01H183276 0.8 ENCODE dbSUPER 0.4 +10.2 10239 1 SREBF1 GATA3 EBF1 FOXA1 LOC100271717 SHCBP1L RPS3AP8 NMNAT2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP8 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP8 Gene

Chromosome:
1
Start:
183,266,500 bp from pter
End:
183,267,285 bp from pter
Size:
786 bases
Orientation:
Plus strand

Genomic View for RPS3AP8 Gene

Genes around RPS3AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP8 Gene

Proteins for RPS3AP8 Gene

Post-translational modifications for RPS3AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP8 Gene

Domains & Families for RPS3AP8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP8 Gene

Function for RPS3AP8 Gene

Phenotypes From GWAS Catalog for RPS3AP8 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP8 Gene

Localization for RPS3AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP8 Gene

Pathways & Interactions for RPS3AP8 Gene

SuperPathways for RPS3AP8 Gene

No Data Available

Interacting Proteins for RPS3AP8 Gene

Gene Ontology (GO) - Biological Process for RPS3AP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP8 Gene

Drugs & Compounds for RPS3AP8 Gene

No Compound Related Data Available

Transcripts for RPS3AP8 Gene

mRNA/cDNA for RPS3AP8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP8
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP8 Gene

No ASD Table

Relevant External Links for RPS3AP8 Gene

GeneLoc Exon Structure for
RPS3AP8
ECgene alternative splicing isoforms for
RPS3AP8

Expression for RPS3AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP8 Gene

mRNA differential expression in normal tissues according to GTEx for RPS3AP8 Gene

This gene is overexpressed in Brain - Cerebellum (x17.7), Brain - Cerebellar Hemisphere (x10.3), and Pituitary (x6.0).

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP8 Gene:

RPS3AP8
genes like me logo Genes that share expression patterns with RPS3AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP8 Gene

Orthologs for RPS3AP8 Gene

Evolution for RPS3AP8 Gene

ENSEMBL:
Gene Tree for RPS3AP8 (if available)
TreeFam:
Gene Tree for RPS3AP8 (if available)

No data available for Orthologs for RPS3AP8 Gene

Paralogs for RPS3AP8 Gene

No data available for Paralogs for RPS3AP8 Gene

Variants for RPS3AP8 Gene

Relevant External Links for RPS3AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP8 Gene

Disorders for RPS3AP8 Gene

No disorders were found for RPS3AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP8 Gene

Publications for RPS3AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS3AP8 Gene

Sources for RPS3AP8 Gene

Content
Loading form....