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Aliases for RPS3AP6 Gene

Aliases for RPS3AP6 Gene

  • Ribosomal Protein S3A Pseudogene 6 2 3 5
  • RPS3A_20_1440 3
  • RPS3A-Like 3

External Ids for RPS3AP6 Gene

Previous GeneCards Identifiers for RPS3AP6 Gene

  • GC15P057848
  • GC15P060061
  • GC15P036882

Summaries for RPS3AP6 Gene

GeneCards Summary for RPS3AP6 Gene

RPS3AP6 (Ribosomal Protein S3A Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP6 Gene

Genomics for RPS3AP6 Gene

Regulatory Elements for RPS3AP6 Gene

Promoters for RPS3AP6 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RPS3AP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP6 Gene

Chromosome:
15
Start:
59,768,330 bp from pter
End:
59,769,188 bp from pter
Size:
859 bases
Orientation:
Plus strand

Genomic View for RPS3AP6 Gene

Genes around RPS3AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP6 Gene

Proteins for RPS3AP6 Gene

Post-translational modifications for RPS3AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP6 Gene

Domains & Families for RPS3AP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP6 Gene

Function for RPS3AP6 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP6 Gene

Localization for RPS3AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS3AP6 Gene

Pathways & Interactions for RPS3AP6 Gene

SuperPathways for RPS3AP6 Gene

No Data Available

Interacting Proteins for RPS3AP6 Gene

Gene Ontology (GO) - Biological Process for RPS3AP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP6 Gene

Drugs & Compounds for RPS3AP6 Gene

No Compound Related Data Available

Transcripts for RPS3AP6 Gene

mRNA/cDNA for RPS3AP6 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP6 Gene

No ASD Table

Relevant External Links for RPS3AP6 Gene

GeneLoc Exon Structure for
RPS3AP6
ECgene alternative splicing isoforms for
RPS3AP6

Expression for RPS3AP6 Gene

mRNA expression in normal human tissues for RPS3AP6 Gene

Protein differential expression in normal tissues from HIPED for RPS3AP6 Gene

This gene is overexpressed in Saliva (37.3) and Heart (27.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from for RPS3AP6 Gene



genes like me logo Genes that share expression patterns with RPS3AP6: view

Protein tissue co-expression partners for RPS3AP6 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for RPS3AP6 Gene

Orthologs for RPS3AP6 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for RPS3AP6 Gene

Organism Taxonomy Gene Similarity Type Details
soybean
(Glycine max)
eudicotyledons Gma.10737 35
Species with no ortholog for RPS3AP6:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RPS3AP6 Gene

ENSEMBL:
Gene Tree for RPS3AP6 (if available)
TreeFam:
Gene Tree for RPS3AP6 (if available)

Paralogs for RPS3AP6 Gene

No data available for Paralogs for RPS3AP6 Gene

Variants for RPS3AP6 Gene

Relevant External Links for RPS3AP6 Gene

HapMap Linkage Disequilibrium report
RPS3AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP6 Gene

Disorders for RPS3AP6 Gene

No disorders were found for RPS3AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP6 Gene

Publications for RPS3AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 67

Products for RPS3AP6 Gene

Sources for RPS3AP6 Gene

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