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Aliases for RPS3AP51 Gene

Aliases for RPS3AP51 Gene

  • Ribosomal Protein S3a Pseudogene 51 2 3
  • RPS3A_23_1744 3
  • CTA-85E5.6 5

External Ids for RPS3AP51 Gene

Previous GeneCards Identifiers for RPS3AP51 Gene

  • GC22U900528
  • GC22M030533

Summaries for RPS3AP51 Gene

GeneCards Summary for RPS3AP51 Gene

RPS3AP51 (Ribosomal Protein S3a Pseudogene 51) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP51 Gene

Genomics for RPS3AP51 Gene

Regulatory Elements for RPS3AP51 Gene

Enhancers for RPS3AP51 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22G030190 2 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -57.6 -57612 9.1 CREB3L1 ZFP64 DMAP1 FEZF1 YY1 ZNF143 SP3 NFYC TBX21 ZNF610 OSM MTMR3 HORMAD2-AS1 ASCC2 SELENOM SF3A1 SLC35E4 MTFP1 DUSP18 CCDC157
GH22G030108 1.2 Ensembl ENCODE 0.3 +29.0 28998 0.7 FOXA2 ATF1 DMAP1 YBX1 ZNF2 ZNF48 ZNF121 GATA2 NFYC REST ASCC2 HORMAD2-AS1 TUG1 RPL36P17 RPS3AP51
GH22G030181 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -46.1 -46055 4.2 HDAC1 PKNOX1 ATF1 TBL1XR1 TCF12 ZNF766 GATA2 SMARCA4 KLF16 PBX2 LIF ASCC2 HORMAD2-AS1 LOC105372988 LIF-AS1 MTMR3 DUSP18 OSM SF3A1 RPS3AP51
GH22G030160 1 Ensembl ENCODE 0.3 -22.3 -22336 0.9 CTCF MAFG CEBPB CEBPG RAD21 FOXA1 JUND ZNF316 MAFF CEBPA LIF LOC105372988 LIF-AS1 CASTOR1 RPS3AP51
GH22G030151 0.6 FANTOM5 0.4 -14.0 -14022 0.3 GATAD2A SOX5 SMAD4 RXRB RARA LOC105372988 LIF-AS1 CASTOR1 LIF RPS3AP51
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP51 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP51 Gene

Chromosome:
22
Start:
30,136,630 bp from pter
End:
30,137,681 bp from pter
Size:
1,052 bases
Orientation:
Minus strand

Genomic View for RPS3AP51 Gene

Genes around RPS3AP51 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP51 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP51 Gene

Proteins for RPS3AP51 Gene

Post-translational modifications for RPS3AP51 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP51 Gene

Domains & Families for RPS3AP51 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP51 Gene

Function for RPS3AP51 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP51 Gene

Localization for RPS3AP51 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS3AP51 Gene

Pathways & Interactions for RPS3AP51 Gene

SuperPathways for RPS3AP51 Gene

No Data Available

Interacting Proteins for RPS3AP51 Gene

Gene Ontology (GO) - Biological Process for RPS3AP51 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP51 Gene

Drugs & Compounds for RPS3AP51 Gene

No Compound Related Data Available

Transcripts for RPS3AP51 Gene

mRNA/cDNA for RPS3AP51 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP51 Gene

No ASD Table

Relevant External Links for RPS3AP51 Gene

GeneLoc Exon Structure for
RPS3AP51
ECgene alternative splicing isoforms for
RPS3AP51

Expression for RPS3AP51 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP51 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP51 Gene:

RPS3AP51
genes like me logo Genes that share expression patterns with RPS3AP51: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP51 Gene

Orthologs for RPS3AP51 Gene

Evolution for RPS3AP51 Gene

ENSEMBL:
Gene Tree for RPS3AP51 (if available)
TreeFam:
Gene Tree for RPS3AP51 (if available)

No data available for Orthologs for RPS3AP51 Gene

Paralogs for RPS3AP51 Gene

No data available for Paralogs for RPS3AP51 Gene

Variants for RPS3AP51 Gene

Relevant External Links for RPS3AP51 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP51

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP51 Gene

Disorders for RPS3AP51 Gene

Relevant External Links for RPS3AP51

Genetic Association Database (GAD)
RPS3AP51

No disorders were found for RPS3AP51 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3AP51 Gene

Publications for RPS3AP51 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. (PMID: 21546767) Murea M. … Freedman B.I. (Am. J. Nephrol. 2011) 46 64
  3. Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci. (PMID: 21102463) Franke A. … Parkes M. (Nat. Genet. 2010) 46 64
  4. Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes. (PMID: 19430480) Barrett J.C. … Rich S.S. (Nat. Genet. 2009) 46 64

Products for RPS3AP51 Gene

Sources for RPS3AP51 Gene

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