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Aliases for RPS3AP50 Gene

Aliases for RPS3AP50 Gene

  • Ribosomal Protein S3a Pseudogene 50 2 3 5
  • RPS3A_24_1646 3

External Ids for RPS3AP50 Gene

Previous GeneCards Identifiers for RPS3AP50 Gene

  • GC19U901017
  • GC19P033832

Summaries for RPS3AP50 Gene

GeneCards Summary for RPS3AP50 Gene

RPS3AP50 (Ribosomal Protein S3a Pseudogene 50) is a Pseudogene.

Additional gene information for RPS3AP50 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP50 Gene

Genomics for RPS3AP50 Gene

Regulatory Elements for RPS3AP50 Gene

Enhancers for RPS3AP50 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H033350 1.4 FANTOM5 ENCODE dbSUPER 0.4 +10.1 10120 1 FOXA2 PKNOX1 ZBTB21 INSM2 ZNF704 MAX ZNF121 ZFHX2 ZNF366 FOS CEBPG PDCD5 CHST8 CEBPA-AS1 RPS3AP50 AKR1B1P7
GH19H033343 0.6 ENCODE 0.7 +3.9 3901 1 ZNF121 ZFHX2 ZNF211 ZNF341 ZSCAN4 EGR2 CEBPG RPS3AP50 AKR1B1P7
GH19H033348 0.9 ENCODE 0.4 +8.2 8164 0 TBP ZNF76 ZNF2 YY1 ZNF121 ZNF366 ZSCAN5C KLF7 ZNF548 USF2 GPATCH1 KIAA0355 CEP89 LSM14A CEBPG DPY19L3 RPS3AP50 AKR1B1P7
GH19H033358 0.2 dbSUPER 0.4 +18.0 17990 1 CEBPG CEBPA-AS1 CHST8 AKR1B1P7 RPS3AP50
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP50 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP50 Gene

Chromosome:
19
Start:
33,340,686 bp from pter
End:
33,341,984 bp from pter
Size:
1,299 bases
Orientation:
Plus strand

Genomic View for RPS3AP50 Gene

Genes around RPS3AP50 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP50 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP50 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP50 Gene

Proteins for RPS3AP50 Gene

Post-translational modifications for RPS3AP50 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP50 Gene

Domains & Families for RPS3AP50 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP50 Gene

Function for RPS3AP50 Gene

Phenotypes From GWAS Catalog for RPS3AP50 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP50
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP50 Gene

Localization for RPS3AP50 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP50 Gene

Pathways & Interactions for RPS3AP50 Gene

SuperPathways for RPS3AP50 Gene

No Data Available

Interacting Proteins for RPS3AP50 Gene

Gene Ontology (GO) - Biological Process for RPS3AP50 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP50 Gene

Drugs & Compounds for RPS3AP50 Gene

No Compound Related Data Available

Transcripts for RPS3AP50 Gene

mRNA/cDNA for RPS3AP50 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP50
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP50 Gene

No ASD Table

Relevant External Links for RPS3AP50 Gene

GeneLoc Exon Structure for
RPS3AP50
ECgene alternative splicing isoforms for
RPS3AP50

Expression for RPS3AP50 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP50 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP50 Gene:

RPS3AP50
genes like me logo Genes that share expression patterns with RPS3AP50: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP50 Gene

Orthologs for RPS3AP50 Gene

Evolution for RPS3AP50 Gene

ENSEMBL:
Gene Tree for RPS3AP50 (if available)
TreeFam:
Gene Tree for RPS3AP50 (if available)

No data available for Orthologs for RPS3AP50 Gene

Paralogs for RPS3AP50 Gene

No data available for Paralogs for RPS3AP50 Gene

Variants for RPS3AP50 Gene

Relevant External Links for RPS3AP50 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP50

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP50 Gene

Disorders for RPS3AP50 Gene

No disorders were found for RPS3AP50 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP50 Gene

Publications for RPS3AP50 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS3AP50 Gene

Sources for RPS3AP50 Gene

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