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Aliases for RPS3AP5 Gene

Aliases for RPS3AP5 Gene

  • Ribosomal Protein S3A Pseudogene 5 2 3 5
  • RPS3A_15_1074 3
  • BA486O22.3 3

External Ids for RPS3AP5 Gene

Previous GeneCards Identifiers for RPS3AP5 Gene

  • GC10U900524
  • GC10P086312
  • GC10P080165

Summaries for RPS3AP5 Gene

GeneCards Summary for RPS3AP5 Gene

RPS3AP5 (Ribosomal Protein S3A Pseudogene 5) is a Pseudogene.

Additional gene information for RPS3AP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP5 Gene

Genomics for RPS3AP5 Gene

Regulatory Elements for RPS3AP5 Gene

Enhancers for RPS3AP5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H084186 0.8 dbSUPER 21.8 -373.0 -372965 2 HDGF ZSCAN4 ZNF175 ZNF266 GLI4 CDC5L ZNF239 SOX6 ZNF621 REST ENSG00000271933 RPS3AP5 CDHR1 LRIT2 GHITM GC10P084182
GH10H083983 0.9 ENCODE 17.8 -576.6 -576624 0 PKNOX1 INSM2 ZNF76 FEZF1 ZEB1 GLIS2 ELK1 ZNF366 ZSCAN5C SCRT2 RPS3AP5 ENSG00000271933 LOC105378398 RNU1-65P
GH10H084137 1.2 ENCODE 12 -421.0 -421018 4 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GHITM RPS3AP5 CDHR1 ENSG00000271933 C10orf99 GC10M084047
GH10H084348 0.8 Ensembl ENCODE 10.5 -211.3 -211343 1 ZNF202 ZNF362 JUND JUN FOS ENSG00000271933 RPS3AP5 LRIT2 CCSER2 RPL12P29
GH10H084539 1 Ensembl ENCODE 0.3 -20.1 -20062 2 CTCF TFAP4 ZNF654 PKNOX1 RB1 ETV1 REST ZNF644 RAD21 TEAD3 CCSER2 ENSG00000271933 RPS3AP5 CACYBPP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP5 Gene

Chromosome:
10
Start:
84,560,419 bp from pter
End:
84,561,306 bp from pter
Size:
888 bases
Orientation:
Plus strand

Genomic View for RPS3AP5 Gene

Genes around RPS3AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP5 Gene

Proteins for RPS3AP5 Gene

Post-translational modifications for RPS3AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP5 Gene

Domains & Families for RPS3AP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP5 Gene

Function for RPS3AP5 Gene

Phenotypes From GWAS Catalog for RPS3AP5 Gene

Phenotypes for RPS3AP5 Gene

GenomeRNAi human phenotypes for RPS3AP5:
genes like me logo Genes that share phenotypes with RPS3AP5: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP5 Gene

Localization for RPS3AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP5 Gene

Pathways & Interactions for RPS3AP5 Gene

SuperPathways for RPS3AP5 Gene

No Data Available

Interacting Proteins for RPS3AP5 Gene

Gene Ontology (GO) - Biological Process for RPS3AP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP5 Gene

Drugs & Compounds for RPS3AP5 Gene

No Compound Related Data Available

Transcripts for RPS3AP5 Gene

mRNA/cDNA for RPS3AP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP5
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP5 Gene

No ASD Table

Relevant External Links for RPS3AP5 Gene

GeneLoc Exon Structure for
RPS3AP5
ECgene alternative splicing isoforms for
RPS3AP5

Expression for RPS3AP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP5 Gene:

RPS3AP5
genes like me logo Genes that share expression patterns with RPS3AP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP5 Gene

Orthologs for RPS3AP5 Gene

Evolution for RPS3AP5 Gene

ENSEMBL:
Gene Tree for RPS3AP5 (if available)
TreeFam:
Gene Tree for RPS3AP5 (if available)

No data available for Orthologs for RPS3AP5 Gene

Paralogs for RPS3AP5 Gene

No data available for Paralogs for RPS3AP5 Gene

Variants for RPS3AP5 Gene

Relevant External Links for RPS3AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP5 Gene

Disorders for RPS3AP5 Gene

Relevant External Links for RPS3AP5

Genetic Association Database (GAD)
RPS3AP5

No disorders were found for RPS3AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3AP5 Gene

Publications for RPS3AP5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 60

Products for RPS3AP5 Gene

Sources for RPS3AP5 Gene

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