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Aliases for RPS3AP46 Gene

Aliases for RPS3AP46 Gene

  • Ribosomal Protein S3a Pseudogene 46 2 3 5
  • RPS3A_19_1365 3

External Ids for RPS3AP46 Gene

Previous GeneCards Identifiers for RPS3AP46 Gene

  • GC14U900924
  • GC14P054080

Summaries for RPS3AP46 Gene

GeneCards Summary for RPS3AP46 Gene

RPS3AP46 (Ribosomal Protein S3a Pseudogene 46) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP46 Gene

Genomics for RPS3AP46 Gene

Regulatory Elements for RPS3AP46 Gene

Enhancers for RPS3AP46 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F053608 0.9 FANTOM5 ENCODE 0.8 -4.1 -4117 0.9 KLF1 JUN USF2 KLF4 JUND FOSL2 FOS TCF7L2 RPS3AP46 GC14M053511
GH14F053599 0.4 ENCODE 0.4 -12.9 -12907 0.2 TEAD4 GC14M053511 RPS3AP46
GH14F053600 0.4 ENCODE 0.4 -13.3 -13291 0.6 HLF TEAD4 GC14M053511 RPS3AP46
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP46 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP46 Gene

Chromosome:
14
Start:
53,612,724 bp from pter
End:
53,613,405 bp from pter
Size:
682 bases
Orientation:
Plus strand

Genomic View for RPS3AP46 Gene

Genes around RPS3AP46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP46 Gene

Proteins for RPS3AP46 Gene

Post-translational modifications for RPS3AP46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP46 Gene

Domains & Families for RPS3AP46 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP46 Gene

Function for RPS3AP46 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP46 Gene

Localization for RPS3AP46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS3AP46 Gene

Pathways & Interactions for RPS3AP46 Gene

SuperPathways for RPS3AP46 Gene

No Data Available

Interacting Proteins for RPS3AP46 Gene

Gene Ontology (GO) - Biological Process for RPS3AP46 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP46 Gene

Transcripts for RPS3AP46 Gene

mRNA/cDNA for RPS3AP46 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP46 Gene

No ASD Table

Relevant External Links for RPS3AP46 Gene

GeneLoc Exon Structure for
RPS3AP46
ECgene alternative splicing isoforms for
RPS3AP46

Expression for RPS3AP46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3AP46 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP46 Gene:

RPS3AP46
genes like me logo Genes that share expression patterns with RPS3AP46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS3AP46 Gene

Orthologs for RPS3AP46 Gene

Evolution for RPS3AP46 Gene

ENSEMBL:
Gene Tree for RPS3AP46 (if available)
TreeFam:
Gene Tree for RPS3AP46 (if available)

No data available for Orthologs for RPS3AP46 Gene

Paralogs for RPS3AP46 Gene

No data available for Paralogs for RPS3AP46 Gene

Variants for RPS3AP46 Gene

Relevant External Links for RPS3AP46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP46 Gene

Disorders for RPS3AP46 Gene

Relevant External Links for RPS3AP46

Genetic Association Database (GAD)
RPS3AP46

No disorders were found for RPS3AP46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3AP46 Gene

Publications for RPS3AP46 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study reveals genetic risk underlying Parkinson's disease. (PMID: 19915575) SimA^n-SA!nchez J. … Gasser T. (Nat. Genet. 2009) 46 64
  3. Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer. (PMID: 19011631) Houlston R.S. … Dunlop M.G. (Nat. Genet. 2008) 46 64
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs J.B. … Dupuis J. (BMC Med. Genet. 2007) 46 64

Products for RPS3AP46 Gene

Sources for RPS3AP46 Gene

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