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Aliases for RPS3AP42 Gene

Aliases for RPS3AP42 Gene

  • Ribosomal Protein S3a Pseudogene 42 2 3 5
  • RPS3A_20_1165 3

External Ids for RPS3AP42 Gene

Previous GeneCards Identifiers for RPS3AP42 Gene

  • GC11U901295
  • GC11M092232

Summaries for RPS3AP42 Gene

GeneCards Summary for RPS3AP42 Gene

RPS3AP42 (Ribosomal Protein S3a Pseudogene 42) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP42 Gene

Genomics for RPS3AP42 Gene

Regulatory Elements for RPS3AP42 Gene

Enhancers for RPS3AP42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F092510 0.6 ENCODE 0.4 -12.8 -12786 2.0 ZNF146 PKNOX1 BCL11A TEAD4 MAX GC11M092863 RPS3AP42
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP42 Gene

Chromosome:
11
Start:
92,498,101 bp from pter
End:
92,498,958 bp from pter
Size:
858 bases
Orientation:
Minus strand

Genomic View for RPS3AP42 Gene

Genes around RPS3AP42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP42 Gene

Proteins for RPS3AP42 Gene

Post-translational modifications for RPS3AP42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP42 Gene

Domains & Families for RPS3AP42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP42 Gene

Function for RPS3AP42 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP42 Gene

Localization for RPS3AP42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS3AP42 Gene

Pathways & Interactions for RPS3AP42 Gene

SuperPathways for RPS3AP42 Gene

No Data Available

Interacting Proteins for RPS3AP42 Gene

Gene Ontology (GO) - Biological Process for RPS3AP42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP42 Gene

Transcripts for RPS3AP42 Gene

mRNA/cDNA for RPS3AP42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP42 Gene

No ASD Table

Relevant External Links for RPS3AP42 Gene

GeneLoc Exon Structure for
RPS3AP42
ECgene alternative splicing isoforms for
RPS3AP42

Expression for RPS3AP42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3AP42 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP42 Gene:

RPS3AP42
genes like me logo Genes that share expression patterns with RPS3AP42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS3AP42 Gene

Orthologs for RPS3AP42 Gene

Evolution for RPS3AP42 Gene

ENSEMBL:
Gene Tree for RPS3AP42 (if available)
TreeFam:
Gene Tree for RPS3AP42 (if available)

No data available for Orthologs for RPS3AP42 Gene

Paralogs for RPS3AP42 Gene

No data available for Paralogs for RPS3AP42 Gene

Variants for RPS3AP42 Gene

Relevant External Links for RPS3AP42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP42 Gene

Disorders for RPS3AP42 Gene

Relevant External Links for RPS3AP42

Genetic Association Database (GAD)
RPS3AP42

No disorders were found for RPS3AP42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3AP42 Gene

Publications for RPS3AP42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association study of gestational diabetes mellitus in Korean women. (PMID: 22233651) Kwak S.H. … Park K.S. (Diabetes 2012) 46 64
  3. Genome-wide screen for metabolic syndrome susceptibility Loci reveals strong lipid gene contribution but no evidence for common genetic basis for clustering of metabolic syndrome traits. (PMID: 22399527) Kristiansson K. … Salomaa V. (Circ Cardiovasc Genet 2012) 46 64
  4. Genome-wide association study of conduct disorder symptomatology. (PMID: 20585324) Dick D.M. … Bierut L. (Mol. Psychiatry 2011) 46 64
  5. A bivariate genome-wide approach to metabolic syndrome: STAMPEED consortium. (PMID: 21386085) Kraja A.T. … Borecki I.B. (Diabetes 2011) 46 64

Products for RPS3AP42 Gene

Sources for RPS3AP42 Gene

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