Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS3AP38 Gene

Aliases for RPS3AP38 Gene

  • Ribosomal Protein S3a Pseudogene 38 2 3 5
  • RPS3A_17_1053 3

External Ids for RPS3AP38 Gene

Previous GeneCards Identifiers for RPS3AP38 Gene

  • GC10U901142
  • GC10M069721

Summaries for RPS3AP38 Gene

GeneCards Summary for RPS3AP38 Gene

RPS3AP38 (Ribosomal Protein S3a Pseudogene 38) is a Pseudogene.

Additional gene information for RPS3AP38 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP38 Gene

Genomics for RPS3AP38 Gene

GeneHancer (GH) Regulatory Elements for RPS3AP38 Gene

Promoters and enhancers for RPS3AP38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I068327 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.6 -370.8 -370776 9.1 CLOCK MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF213 E2F8 HNRNPH3 PBLD DDX50 HERC4 CCAR1 SIRT1 DNA2 RPL26P27 TET1 RPS3AP38
GH10I067883 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.7 +76.2 76238 3.5 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SIRT1 HERC4 CCAR1 HNRNPH3 RPL12P8 TET1 RPS3AP38 RPL26P27 MYPN GC10M067961
GH10I068119 Enhancer 0.8 dbSUPER 10 -158.4 -158354 1.1 ZNF529 ZFP64 MZF1 ZNF213 ZNF354C ZNF138 ZNF202 ZNF680 ZBTB11 ZC3H11A CCAR1 HNRNPH3 DDX50 SIRT1 HERC4 TET1 KIF1BP RUFY2 ENSG00000260400 RPL26P27
GH10I067788 Enhancer 1.1 Ensembl ENCODE 4.4 +172.9 172858 0.5 ELF3 PKNOX1 RB1 ARNT ARID4B ZNF2 THRB ZNF48 RAD21 ZBTB40 RPS3AP38 RPL21P92 TRS-TGA1-1
GH10I067976 Enhancer 0.5 ENCODE 0.4 -15.7 -15726 1.7 USF1 NFIA SCRT2 HNF4A CEBPG ZIC2 YY1 HERC4 RPS3AP38 RN7SL220P GC10M068008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS3AP38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3AP38 Gene

Genomic Locations for RPS3AP38 Gene
chr10:67,960,685-67,961,494
(GRCh38/hg38)
Size:
810 bases
Orientation:
Minus strand
chr10:69,720,442-69,721,251
(GRCh37/hg19)

Genomic View for RPS3AP38 Gene

Genes around RPS3AP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP38 Gene

Proteins for RPS3AP38 Gene

Post-translational modifications for RPS3AP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP38 Gene

Domains & Families for RPS3AP38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP38 Gene

Function for RPS3AP38 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP38 Gene

Localization for RPS3AP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP38 Gene

Pathways & Interactions for RPS3AP38 Gene

SuperPathways for RPS3AP38 Gene

No Data Available

Interacting Proteins for RPS3AP38 Gene

Gene Ontology (GO) - Biological Process for RPS3AP38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP38 Gene

Drugs & Compounds for RPS3AP38 Gene

No Compound Related Data Available

Transcripts for RPS3AP38 Gene

mRNA/cDNA for RPS3AP38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP38 Gene

No ASD Table

Relevant External Links for RPS3AP38 Gene

GeneLoc Exon Structure for
RPS3AP38
ECgene alternative splicing isoforms for
RPS3AP38

Expression for RPS3AP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP38 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP38 Gene:

RPS3AP38
genes like me logo Genes that share expression patterns with RPS3AP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP38 Gene

Orthologs for RPS3AP38 Gene

Evolution for RPS3AP38 Gene

ENSEMBL:
Gene Tree for RPS3AP38 (if available)
TreeFam:
Gene Tree for RPS3AP38 (if available)

No data available for Orthologs for RPS3AP38 Gene

Paralogs for RPS3AP38 Gene

No data available for Paralogs for RPS3AP38 Gene

Variants for RPS3AP38 Gene

Additional Variant Information for RPS3AP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP38 Gene

Disorders for RPS3AP38 Gene

No disorders were found for RPS3AP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP38 Gene

Publications for RPS3AP38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS3AP38 Gene

Sources for RPS3AP38 Gene

Content
Loading form....