Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS3AP38 Gene

Aliases for RPS3AP38 Gene

  • Ribosomal Protein S3a Pseudogene 38 2 3 5
  • RPS3A_17_1053 3

External Ids for RPS3AP38 Gene

Previous GeneCards Identifiers for RPS3AP38 Gene

  • GC10U901142
  • GC10M069721

Summaries for RPS3AP38 Gene

GeneCards Summary for RPS3AP38 Gene

RPS3AP38 (Ribosomal Protein S3a Pseudogene 38) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP38 Gene

Genomics for RPS3AP38 Gene

Regulatory Elements for RPS3AP38 Gene

Enhancers for RPS3AP38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G068327 1.8 FANTOM5 ENCODE dbSUPER 10.4 -370.8 -370777 9.1 CREB3L1 MLX AGO1 ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 DNA2 SIRT1 RPS3AP38 CCAR1 DDX50 HNRNPH3 PBLD
GH10G067788 1.2 Ensembl ENCODE 4.4 +172.9 172859 0.5 ELF3 PKNOX1 RB1 ARNT ARID4B ZNF2 THRB ZNF48 RAD21 YY1 RPS3AP38 RPL21P92 TRS-TGA1-1
GH10G067976 0.6 ENCODE 0.4 -15.7 -15726 1.7 ZNF263 NFIA TEAD4 CEBPG ZIC2 YY1 ZFHX2 SCRT2 HNF4A EGR2 HERC4 RPS3AP38 GC10M068008 RN7SL220P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP38 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP38 Gene

Chromosome:
10
Start:
67,960,685 bp from pter
End:
67,961,494 bp from pter
Size:
810 bases
Orientation:
Minus strand

Genomic View for RPS3AP38 Gene

Genes around RPS3AP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP38 Gene

Proteins for RPS3AP38 Gene

Post-translational modifications for RPS3AP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP38 Gene

Domains & Families for RPS3AP38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP38 Gene

Function for RPS3AP38 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP38 Gene

Localization for RPS3AP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS3AP38 Gene

Pathways & Interactions for RPS3AP38 Gene

SuperPathways for RPS3AP38 Gene

No Data Available

Interacting Proteins for RPS3AP38 Gene

Gene Ontology (GO) - Biological Process for RPS3AP38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP38 Gene

Drugs & Compounds for RPS3AP38 Gene

No Compound Related Data Available

Transcripts for RPS3AP38 Gene

mRNA/cDNA for RPS3AP38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP38 Gene

No ASD Table

Relevant External Links for RPS3AP38 Gene

GeneLoc Exon Structure for
RPS3AP38
ECgene alternative splicing isoforms for
RPS3AP38

Expression for RPS3AP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP38 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP38 Gene:

RPS3AP38
genes like me logo Genes that share expression patterns with RPS3AP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP38 Gene

Orthologs for RPS3AP38 Gene

Evolution for RPS3AP38 Gene

ENSEMBL:
Gene Tree for RPS3AP38 (if available)
TreeFam:
Gene Tree for RPS3AP38 (if available)

No data available for Orthologs for RPS3AP38 Gene

Paralogs for RPS3AP38 Gene

No data available for Paralogs for RPS3AP38 Gene

Variants for RPS3AP38 Gene

Relevant External Links for RPS3AP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP38 Gene

Disorders for RPS3AP38 Gene

No disorders were found for RPS3AP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP38 Gene

Publications for RPS3AP38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS3AP38 Gene

Sources for RPS3AP38 Gene

Content
Loading form....