Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS3AP28 Gene

Aliases for RPS3AP28 Gene

  • Ribosomal Protein S3a Pseudogene 28 2 3
  • RPS3A_13_855 3
  • AC013429.2 5

External Ids for RPS3AP28 Gene

Previous GeneCards Identifiers for RPS3AP28 Gene

  • GC07U902580
  • GC07M138176

Summaries for RPS3AP28 Gene

GeneCards Summary for RPS3AP28 Gene

RPS3AP28 (Ribosomal Protein S3a Pseudogene 28) is a Pseudogene.

Additional gene information for RPS3AP28 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP28 Gene

Genomics for RPS3AP28 Gene

Regulatory Elements for RPS3AP28 Gene

Enhancers for RPS3AP28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H138477 1.3 Ensembl ENCODE dbSUPER 0.4 +14.0 14030 0 SOX13 FOXA2 SAP130 ZSCAN9 RARA CREM SOX5 GATAD2A TEAD1 SP5 TRIM24 RPS3AP28
GH07H138478 1.2 Ensembl ENCODE dbSUPER 0.4 +12.5 12465 1 NR2F1 JUNB DPF2 BATF SSRP1 POLR2A BCL11A IKZF1 SCRT2 HMBOX1 TRIM24 RPS3AP28
GH07H138457 1.4 ENCODE dbSUPER 0.3 +31.1 31061 4 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A ZNF2 YY1 ZNF207 FOS LUC7L2 UBN2 LOC100499191 TRIM24 RPS3AP28
GH07H138472 0.9 ENCODE dbSUPER 0.4 +18.8 18807 0 TFAP4 SAP130 ZNF384 RARA SSRP1 POLR2A PRDM1 SUPT5H SVOPL ENSG00000201465 UQCRFS1P2 TRIM24 RPS3AP28
GH07H138527 1 ENCODE 0.3 -36.8 -36847 0 PKNOX1 ATF1 ARNT TCF12 ZNF766 CBX5 GATA2 ZNF143 ATF7 CEBPZ LUC7L2 TTC26 UBN2 RPS3AP28 GC07M138626 ENSG00000252188
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP28 Gene

Chromosome:
7
Start:
138,490,543 bp from pter
End:
138,491,373 bp from pter
Size:
831 bases
Orientation:
Minus strand

Genomic View for RPS3AP28 Gene

Genes around RPS3AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP28 Gene

Proteins for RPS3AP28 Gene

Post-translational modifications for RPS3AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP28 Gene

Domains & Families for RPS3AP28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP28 Gene

Function for RPS3AP28 Gene

Phenotypes From GWAS Catalog for RPS3AP28 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP28
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP28 Gene

Localization for RPS3AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP28 Gene

Pathways & Interactions for RPS3AP28 Gene

SuperPathways for RPS3AP28 Gene

No Data Available

Interacting Proteins for RPS3AP28 Gene

Gene Ontology (GO) - Biological Process for RPS3AP28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP28 Gene

Drugs & Compounds for RPS3AP28 Gene

No Compound Related Data Available

Transcripts for RPS3AP28 Gene

mRNA/cDNA for RPS3AP28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP28
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP28 Gene

No ASD Table

Relevant External Links for RPS3AP28 Gene

GeneLoc Exon Structure for
RPS3AP28
ECgene alternative splicing isoforms for
RPS3AP28

Expression for RPS3AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP28 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP28 Gene:

RPS3AP28
genes like me logo Genes that share expression patterns with RPS3AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP28 Gene

Orthologs for RPS3AP28 Gene

Evolution for RPS3AP28 Gene

ENSEMBL:
Gene Tree for RPS3AP28 (if available)
TreeFam:
Gene Tree for RPS3AP28 (if available)

No data available for Orthologs for RPS3AP28 Gene

Paralogs for RPS3AP28 Gene

No data available for Paralogs for RPS3AP28 Gene

Variants for RPS3AP28 Gene

Relevant External Links for RPS3AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP28 Gene

Disorders for RPS3AP28 Gene

No disorders were found for RPS3AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP28 Gene

Publications for RPS3AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS3AP28 Gene

Sources for RPS3AP28 Gene

Content
Loading form....