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Aliases for RPS3AP25 Gene

Aliases for RPS3AP25 Gene

  • Ribosomal Protein S3a Pseudogene 25 2 3 5
  • RPS3A_9_820 3

External Ids for RPS3AP25 Gene

Previous GeneCards Identifiers for RPS3AP25 Gene

  • GC07M094164
  • GC07M094325

Summaries for RPS3AP25 Gene

GeneCards Summary for RPS3AP25 Gene

RPS3AP25 (Ribosomal Protein S3a Pseudogene 25) is a Pseudogene.

Additional gene information for RPS3AP25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP25 Gene

Genomics for RPS3AP25 Gene

GeneHancer (GH) Regulatory Elements for RPS3AP25 Gene

Promoters and enhancers for RPS3AP25 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I094942 Enhancer 0.8 ENCODE 67.2 -246.7 -246688 0.6 FOXA2 ZNF529 ZFP64 ZBTB40 ZNF213 ZNF302 ZNF354C ZNF138 ZNF202 ZNF680 RPS3AP25 CASD1 SGCE LOC105375403 BET1 COL1A2 DYNC1I1 PPP1R9A PIR34756 GC07M095019
GH07I094696 Enhancer 1.1 Ensembl ENCODE 0.8 -2.2 -2171 2.8 FOXA2 ARID4B BRCA1 ETS1 YY1 ATF7 FOS PPARG KAT8 NFIL3 RPS3AP25 GC07P094715
GH07I094700 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -5.8 -5814 2.3 ELF3 FOXA2 MLX ARID4B DMAP1 THRB RARA CREM MIXL1 CEBPB PEG10 RPS3AP25 GC07P094715
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS3AP25 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3AP25 Gene

Genomic Locations for RPS3AP25 Gene
chr7:94,694,981-94,695,839
(GRCh38/hg38)
Size:
859 bases
Orientation:
Minus strand
chr7:94,324,293-94,325,151
(GRCh37/hg19)

Genomic View for RPS3AP25 Gene

Genes around RPS3AP25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP25 Gene

Proteins for RPS3AP25 Gene

Post-translational modifications for RPS3AP25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP25 Gene

Domains & Families for RPS3AP25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP25 Gene

Function for RPS3AP25 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP25 Gene

Localization for RPS3AP25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP25 Gene

Pathways & Interactions for RPS3AP25 Gene

SuperPathways for RPS3AP25 Gene

No Data Available

Interacting Proteins for RPS3AP25 Gene

Gene Ontology (GO) - Biological Process for RPS3AP25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP25 Gene

Drugs & Compounds for RPS3AP25 Gene

No Compound Related Data Available

Transcripts for RPS3AP25 Gene

mRNA/cDNA for RPS3AP25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP25 Gene

No ASD Table

Relevant External Links for RPS3AP25 Gene

GeneLoc Exon Structure for
RPS3AP25
ECgene alternative splicing isoforms for
RPS3AP25

Expression for RPS3AP25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP25 Gene:

RPS3AP25
genes like me logo Genes that share expression patterns with RPS3AP25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP25 Gene

Orthologs for RPS3AP25 Gene

Evolution for RPS3AP25 Gene

ENSEMBL:
Gene Tree for RPS3AP25 (if available)
TreeFam:
Gene Tree for RPS3AP25 (if available)

No data available for Orthologs for RPS3AP25 Gene

Paralogs for RPS3AP25 Gene

No data available for Paralogs for RPS3AP25 Gene

Variants for RPS3AP25 Gene

Additional Variant Information for RPS3AP25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP25 Gene

Disorders for RPS3AP25 Gene

No disorders were found for RPS3AP25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP25 Gene

Publications for RPS3AP25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 58

Products for RPS3AP25 Gene

Sources for RPS3AP25 Gene

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