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Aliases for RPS3AP25 Gene

Aliases for RPS3AP25 Gene

  • Ribosomal Protein S3a Pseudogene 25 2 3 5
  • RPS3A_9_820 3

External Ids for RPS3AP25 Gene

Previous GeneCards Identifiers for RPS3AP25 Gene

  • GC07M094164
  • GC07M094325

Summaries for RPS3AP25 Gene

GeneCards Summary for RPS3AP25 Gene

RPS3AP25 (Ribosomal Protein S3a Pseudogene 25) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP25 Gene

Genomics for RPS3AP25 Gene

Regulatory Elements for RPS3AP25 Gene

Enhancers for RPS3AP25 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F094942 0.8 ENCODE 57.7 -246.7 -246689 0.6 ZFP64 ZBTB40 ZNF302 ZNF138 ZNF354C ZNF202 ZNF680 ZNF654 OVOL3 REST RPS3AP25 BET1 LOC105375403 PIR34756 GC07M095019
GH07F095209 0.5 ENCODE 18.5 -514.1 -514140 1.5 ZNF791 CBX3 CBX5 TRIM28 RPS3AP25 PON1 CASD1 ENSG00000273138 PON2 LOC105375405 RNU4-16P
GH07F094373 1.2 Ensembl ENCODE 13.3 +319.8 319824 5.3 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF143 KLF13 ZNF263 RPS3AP25 RPS27P17 LOC105375403 CASD1 GC07P094390 GC07P094145
GH07F094003 0.7 ENCODE 13.2 +691.7 691663 1.9 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 SP3 NFYC ZHX2 REST RPS3AP25 RPS27P17 GNG11 LOC105375403 BET1
GH07F094381 1.2 Ensembl ENCODE 11.6 +313.3 313293 1.2 ZNF202 JUND ZBTB33 RPS3AP25 GC07P094390 GC07P094145
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS3AP25 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP25 Gene

Chromosome:
7
Start:
94,694,981 bp from pter
End:
94,695,839 bp from pter
Size:
859 bases
Orientation:
Minus strand

Genomic View for RPS3AP25 Gene

Genes around RPS3AP25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP25 Gene

Proteins for RPS3AP25 Gene

Post-translational modifications for RPS3AP25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP25 Gene

Domains & Families for RPS3AP25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP25 Gene

Function for RPS3AP25 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP25 Gene

Localization for RPS3AP25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS3AP25 Gene

Pathways & Interactions for RPS3AP25 Gene

SuperPathways for RPS3AP25 Gene

No Data Available

Interacting Proteins for RPS3AP25 Gene

Gene Ontology (GO) - Biological Process for RPS3AP25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP25 Gene

Transcripts for RPS3AP25 Gene

mRNA/cDNA for RPS3AP25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP25 Gene

No ASD Table

Relevant External Links for RPS3AP25 Gene

GeneLoc Exon Structure for
RPS3AP25
ECgene alternative splicing isoforms for
RPS3AP25

Expression for RPS3AP25 Gene

mRNA expression in normal human tissues for RPS3AP25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP25 Gene:

RPS3AP25
genes like me logo Genes that share expression patterns with RPS3AP25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS3AP25 Gene

Orthologs for RPS3AP25 Gene

Evolution for RPS3AP25 Gene

ENSEMBL:
Gene Tree for RPS3AP25 (if available)
TreeFam:
Gene Tree for RPS3AP25 (if available)

No data available for Orthologs for RPS3AP25 Gene

Paralogs for RPS3AP25 Gene

No data available for Paralogs for RPS3AP25 Gene

Variants for RPS3AP25 Gene

Relevant External Links for RPS3AP25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP25 Gene

Disorders for RPS3AP25 Gene

No disorders were found for RPS3AP25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP25 Gene

Publications for RPS3AP25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 64

Products for RPS3AP25 Gene

Sources for RPS3AP25 Gene

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