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Aliases for RPS3AP2 Gene

Subcategory (RNA class) for RPS3AP2 Gene

lncRNA

Aliases for RPS3AP2 Gene

  • Ribosomal Protein S3A Pseudogene 2 2 3 5
  • RPS3A_21_1466 3

External Ids for RPS3AP2 Gene

ORGUL Members for RPS3AP2 Gene

Previous GeneCards Identifiers for RPS3AP2 Gene

  • GC16U990181
  • GC16P001471
  • GC16P001527
  • GC16P001453

Summaries for RPS3AP2 Gene

GeneCards Summary for RPS3AP2 Gene

RPS3AP2 (Ribosomal Protein S3A Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS3AP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP2 Gene

Genomics for RPS3AP2 Gene

Regulatory Elements for RPS3AP2 Gene

Enhancers for RPS3AP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H001677 1.3 ENCODE dbSUPER 10.1 +201.8 201787 4 HDGF PKNOX1 ARID4B SIN3A ZNF2 ZBTB7B YY1 ZNF143 ZNF207 FOS TBL3 TELO2 CRAMP1 WDR24 FAHD1 CLCN7 JPT2 ENSG00000260051 TSC2 E4F1
GH16H001559 0.9 ENCODE dbSUPER 11.2 +82.6 82601 2 ZNF316 SAP130 MAFG FOS EMSY ZNF623 MAFK NR2F2 TMEM204 IFT140 CRAMP1 ENSG00000226890 TELO2 PTX4 CLCN7 RPS3AP2 GNPTG TSR3
GH16H001744 0.9 Ensembl ENCODE 10.5 +268.4 268406 2 STAT1 MAZ JUN CEBPB MNT JUND POLR2A SMC3 KLF9 STAT3 HAGH MAPK8IP3 JPT2 RPS3AP2 CLCN7 ENSG00000261207 GC16P001748 MIR3177
GH16H001634 0.2 ENCODE 10.9 +156.8 156791 0 JPT2 MAPK8IP3 IFT140 RPS3AP2 CLCN7 TMEM204 ENSG00000261732 GC16P001635
GH16H001631 0.2 ENCODE 10.9 +154.4 154441 1 JPT2 MAPK8IP3 IFT140 RPS3AP2 CLCN7 TMEM204 TELO2 ENSG00000261732 GC16P001635
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS3AP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS3AP2 Gene

Chromosome:
16
Start:
1,477,830 bp from pter
End:
1,478,590 bp from pter
Size:
761 bases
Orientation:
Plus strand

Genomic View for RPS3AP2 Gene

Genes around RPS3AP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP2 Gene

Proteins for RPS3AP2 Gene

Post-translational modifications for RPS3AP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP2 Gene

Domains & Families for RPS3AP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP2 Gene

Function for RPS3AP2 Gene

Phenotypes From GWAS Catalog for RPS3AP2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP2 Gene

Localization for RPS3AP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP2 Gene

Pathways & Interactions for RPS3AP2 Gene

SuperPathways for RPS3AP2 Gene

No Data Available

Interacting Proteins for RPS3AP2 Gene

Gene Ontology (GO) - Biological Process for RPS3AP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP2 Gene

Drugs & Compounds for RPS3AP2 Gene

No Compound Related Data Available

Transcripts for RPS3AP2 Gene

mRNA/cDNA for RPS3AP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS3AP2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP2 Gene

No ASD Table

Relevant External Links for RPS3AP2 Gene

GeneLoc Exon Structure for
RPS3AP2
ECgene alternative splicing isoforms for
RPS3AP2

Expression for RPS3AP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP2 Gene

mRNA differential expression in normal tissues according to GTEx for RPS3AP2 Gene

This gene is overexpressed in Testis (x12.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP2 Gene:

RPS3AP2
genes like me logo Genes that share expression patterns with RPS3AP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP2 Gene

Orthologs for RPS3AP2 Gene

Evolution for RPS3AP2 Gene

ENSEMBL:
Gene Tree for RPS3AP2 (if available)
TreeFam:
Gene Tree for RPS3AP2 (if available)

No data available for Orthologs for RPS3AP2 Gene

Paralogs for RPS3AP2 Gene

No data available for Paralogs for RPS3AP2 Gene

Variants for RPS3AP2 Gene

Relevant External Links for RPS3AP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP2 Gene

Disorders for RPS3AP2 Gene

No disorders were found for RPS3AP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP2 Gene

Publications for RPS3AP2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS3AP2 Gene

Sources for RPS3AP2 Gene

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