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Aliases for RPS2P47 Gene

Aliases for RPS2P47 Gene

  • Ribosomal Protein S2 Pseudogene 47 2 3
  • RPS2_25_1553 3
  • RP5-867C24.1 5

External Ids for RPS2P47 Gene

Previous GeneCards Identifiers for RPS2P47 Gene

  • GC17U901163
  • GC17M045237

Summaries for RPS2P47 Gene

GeneCards Summary for RPS2P47 Gene

RPS2P47 (Ribosomal Protein S2 Pseudogene 47) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P47 Gene

Genomics for RPS2P47 Gene

Regulatory Elements for RPS2P47 Gene

Enhancers for RPS2P47 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F047068 1.2 Ensembl ENCODE 31.1 +89.0 88994 4.8 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF548 KANSL1 ARL17B MRPL45P2 ENSG00000266601 CDC27 ENSG00000264701 LOC101927060 LRRC37A17P RPS7P11 RPS2P47
GH17F046263 0.9 FANTOM5 ENCODE 22.2 +894.1 894074 4.5 CREB3L1 ZFP64 DMAP1 YBX1 YY1 ZNF143 SP3 NFYC TBX21 MEF2D ARL17B CRHR1-IT1 LRRC37A4P LOC102724391 KANSL1 RPS7P11 KANSL1-AS1 RPS2P47 NSFP1 MAPK8IP1P1
GH17F048017 0.8 Ensembl ENCODE 21.9 -858.0 -857972 1.5 ZFP64 ARID4B ZNF48 ZSCAN9 DNMT3B ZNF2 RAD21 ZEB1 ZNF121 ZNF354C MRPL45P2 ENSG00000253347 RPS2P47 CDC27 SCRN2 ENSG00000266601 CDK5RAP3 NFE2L1 ENSG00000264701 CBX1
GH17F046741 1 Ensembl ENCODE 21.9 +417.3 417280 2.6 ZNF493 ZFP64 SIN3A FEZF1 ZNF2 ZNF121 GLIS2 KLF7 FOS ZNF202 MRPL45P2 ARL17B LOC102724391 KANSL1-AS1 KANSL1 RPS7P11 ENSG00000253347 NSFP1 RPS2P47 WNT3
GH17F048023 1.2 FANTOM5 Ensembl ENCODE 20.9 -865.3 -865325 4.6 CREB3L1 ZFP64 FEZF1 DMAP1 ZNF143 ZNF548 SP3 NFYC TBX21 MEF2D ENSG00000266601 MRPL45P2 RPS2P47 KPNB1 SNX11 CDK5RAP3 COPZ2 ITGB3 SKAP1 PRR15L
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS2P47 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P47 Gene

Chromosome:
17
Start:
47,159,154 bp from pter
End:
47,159,998 bp from pter
Size:
845 bases
Orientation:
Minus strand

Genomic View for RPS2P47 Gene

Genes around RPS2P47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P47 Gene

Proteins for RPS2P47 Gene

Post-translational modifications for RPS2P47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P47 Gene

Domains & Families for RPS2P47 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P47 Gene

Function for RPS2P47 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P47 Gene

Localization for RPS2P47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS2P47 Gene

Pathways & Interactions for RPS2P47 Gene

SuperPathways for RPS2P47 Gene

No Data Available

Interacting Proteins for RPS2P47 Gene

Gene Ontology (GO) - Biological Process for RPS2P47 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P47 Gene

Transcripts for RPS2P47 Gene

mRNA/cDNA for RPS2P47 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P47 Gene

No ASD Table

Relevant External Links for RPS2P47 Gene

GeneLoc Exon Structure for
RPS2P47
ECgene alternative splicing isoforms for
RPS2P47

Expression for RPS2P47 Gene

mRNA expression in normal human tissues for RPS2P47 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P47 Gene:

RPS2P47
genes like me logo Genes that share expression patterns with RPS2P47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS2P47 Gene

Orthologs for RPS2P47 Gene

Evolution for RPS2P47 Gene

ENSEMBL:
Gene Tree for RPS2P47 (if available)
TreeFam:
Gene Tree for RPS2P47 (if available)

No data available for Orthologs for RPS2P47 Gene

Paralogs for RPS2P47 Gene

No data available for Paralogs for RPS2P47 Gene

Variants for RPS2P47 Gene

Relevant External Links for RPS2P47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P47

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P47 Gene

Disorders for RPS2P47 Gene

Relevant External Links for RPS2P47

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPS2P47

No disorders were found for RPS2P47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P47 Gene

Publications for RPS2P47 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS2P47 Gene

Sources for RPS2P47 Gene

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