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Aliases for RPS2P47 Gene

Aliases for RPS2P47 Gene

  • Ribosomal Protein S2 Pseudogene 47 2 3
  • RPS2_25_1553 3
  • RP5-867C24.1 5

External Ids for RPS2P47 Gene

Previous GeneCards Identifiers for RPS2P47 Gene

  • GC17U901163
  • GC17M045237

Summaries for RPS2P47 Gene

GeneCards Summary for RPS2P47 Gene

RPS2P47 (Ribosomal Protein S2 Pseudogene 47) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P47 Gene

Genomics for RPS2P47 Gene

Regulatory Elements for RPS2P47 Gene

Enhancers for RPS2P47 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G047069 1.5 Ensembl ENCODE 21.4 +88.8 88795 4.4 CREB3L1 MLX AGO1 ZFP64 DMAP1 YBX1 FEZF1 YY1 SLC30A9 ZNF143 ARL17B MRPL45P2 KANSL1 LOC101927060 CDC27 ENSG00000266601 LRRC37A17P ENSG00000264701 RPS2P47 ENSG00000253347
GH17G047941 1.4 ENCODE dbSUPER 20.2 -781.9 -781859 2.0 MLX CREB3L1 DMAP1 YBX1 YY1 SLC30A9 ZNF416 SP3 NFYC TBX21 MRPL45P2 ENSG00000264701 SCRN2 ENSG00000230532 RPS2P47 ENSG00000266601 LOC102724532 SP2-AS1 HOXB4 LRRC37A17P
GH17G046741 1.3 Ensembl ENCODE 21 +417.3 417280 2.6 ARNT ZFP64 SIN3A FEZF1 ZNF2 FOS SP3 JUNB REST ZNF592 ARL17B MRPL45P2 KANSL1-AS1 ENSG00000253347 ENSG00000262372 RPS7P11 LRRC37A17P KANSL1 NSFP1 RPS2P47
GH17G048023 2.1 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -865.3 -865325 4.6 CREB3L1 ZFP64 DMAP1 FEZF1 ZNF143 ZNF548 SP3 NFYC TBX21 MEF2D SNX11 ENSG00000266601 CDK5RAP3 COPZ2 ITGB3 ENSG00000253347 MRPL45P2 SKAP1 PRR15L NFE2L1
GH17G048011 1.9 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -853.4 -853434 4.3 HDGF PKNOX1 ARNT SIN3A ZNF2 ZBTB7B ZNF121 GLIS2 ZNF143 ZNF207 PRR15L SCRN2 COPZ2 CDK5RAP3 SKAP1 MRPL45P2 CBX1 SUMO2P17 MIR152 RPS2P47
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS2P47 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P47 Gene

Chromosome:
17
Start:
47,159,154 bp from pter
End:
47,159,998 bp from pter
Size:
845 bases
Orientation:
Minus strand

Genomic View for RPS2P47 Gene

Genes around RPS2P47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P47 Gene

Proteins for RPS2P47 Gene

Post-translational modifications for RPS2P47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P47 Gene

Domains & Families for RPS2P47 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P47 Gene

Function for RPS2P47 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P47 Gene

Localization for RPS2P47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS2P47 Gene

Pathways & Interactions for RPS2P47 Gene

SuperPathways for RPS2P47 Gene

No Data Available

Interacting Proteins for RPS2P47 Gene

Gene Ontology (GO) - Biological Process for RPS2P47 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P47 Gene

Drugs & Compounds for RPS2P47 Gene

No Compound Related Data Available

Transcripts for RPS2P47 Gene

mRNA/cDNA for RPS2P47 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P47 Gene

No ASD Table

Relevant External Links for RPS2P47 Gene

GeneLoc Exon Structure for
RPS2P47
ECgene alternative splicing isoforms for
RPS2P47

Expression for RPS2P47 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P47 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P47 Gene:

RPS2P47
genes like me logo Genes that share expression patterns with RPS2P47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P47 Gene

Orthologs for RPS2P47 Gene

Evolution for RPS2P47 Gene

ENSEMBL:
Gene Tree for RPS2P47 (if available)
TreeFam:
Gene Tree for RPS2P47 (if available)

No data available for Orthologs for RPS2P47 Gene

Paralogs for RPS2P47 Gene

No data available for Paralogs for RPS2P47 Gene

Variants for RPS2P47 Gene

Relevant External Links for RPS2P47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P47

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P47 Gene

Disorders for RPS2P47 Gene

Relevant External Links for RPS2P47

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPS2P47

No disorders were found for RPS2P47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P47 Gene

Publications for RPS2P47 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS2P47 Gene

Sources for RPS2P47 Gene

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