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Aliases for RPS2P45 Gene

Aliases for RPS2P45 Gene

  • Ribosomal Protein S2 Pseudogene 45 2 3 5
  • RPS2_21_1492 3

External Ids for RPS2P45 Gene

Previous GeneCards Identifiers for RPS2P45 Gene

  • GC16P067626
  • GC16P054940

Summaries for RPS2P45 Gene

GeneCards Summary for RPS2P45 Gene

RPS2P45 (Ribosomal Protein S2 Pseudogene 45) is a Pseudogene.

Additional gene information for RPS2P45 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P45 Gene

Genomics for RPS2P45 Gene

GeneHancer (GH) Regulatory Elements for RPS2P45 Gene

Promoters and enhancers for RPS2P45 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I069031 Enhancer 0.8 ENCODE 550.8 -1.6 -1617 1.1 ELF3 FOXA2 MLX ARID4B RAD21 RARA ETS1 SCRT2 THAP11 MIXL1 RPS2P45 RNU6-898P HAS3 NOB1 LOC101060098 TANGO6
GH16I069422 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.7 +391.0 391030 3.3 HDGF PKNOX1 SMAD1 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 CYB5B GC16M069467 GC16M069459 DDX19B PDPR NFAT5 NONOP1 CHTF8 ZFP90 LOC400541
GH16I069039 Enhancer 1.1 Ensembl ENCODE 0.4 +6.7 6666 2.1 FOXA2 ARID4B DMAP1 YY1 RXRA SP5 ZHX2 MXD4 REST PPARG HAS3 NOB1 SNTB2 RPS2P45 TANGO6
GH16I069070 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +39.1 39075 3.6 SIN3A ETS1 GTF3C2 GLIS2 FOS MCM3 REST NFIL3 ZSCAN16 GLIS1 PRMT7 NFAT5 NONOP1 SNTB2 ZFP90 ENSG00000259797 CHTF8 ENSG00000263276 NIP7 ENSG00000260891
GH16I069057 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +24.4 24422 1.8 MEIS2 PKNOX1 MAX SIN3A EBF1 BATF IRF4 RCOR1 FOSL2 IKZF2 CDH1 TMED6 RPS2P45 HAS3 TANGO6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS2P45 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS2P45 Gene

Genomic Locations for RPS2P45 Gene
chr16:69,033,630-69,036,042
(GRCh38/hg38)
Size:
2,413 bases
Orientation:
Plus strand
chr16:69,067,533-69,069,945
(GRCh37/hg19)

Genomic View for RPS2P45 Gene

Genes around RPS2P45 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P45 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P45 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P45 Gene

Proteins for RPS2P45 Gene

Post-translational modifications for RPS2P45 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P45 Gene

Domains & Families for RPS2P45 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P45 Gene

Function for RPS2P45 Gene

Phenotypes From GWAS Catalog for RPS2P45 Gene

Phenotypes for RPS2P45 Gene

GenomeRNAi human phenotypes for RPS2P45:
genes like me logo Genes that share phenotypes with RPS2P45: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P45 Gene

Localization for RPS2P45 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P45 Gene

Pathways & Interactions for RPS2P45 Gene

SuperPathways for RPS2P45 Gene

No Data Available

Interacting Proteins for RPS2P45 Gene

Gene Ontology (GO) - Biological Process for RPS2P45 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P45 Gene

Drugs & Compounds for RPS2P45 Gene

No Compound Related Data Available

Transcripts for RPS2P45 Gene

mRNA/cDNA for RPS2P45 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(7) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPS2P45 Gene

Ribosomal protein S2 pseudogene 45:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P45 Gene

No ASD Table

Relevant External Links for RPS2P45 Gene

GeneLoc Exon Structure for
RPS2P45
ECgene alternative splicing isoforms for
RPS2P45

Expression for RPS2P45 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P45 Gene

mRNA differential expression in normal tissues according to GTEx for RPS2P45 Gene

This gene is overexpressed in Testis (x16.9).

NURSA nuclear receptor signaling pathways regulating expression of RPS2P45 Gene:

RPS2P45

SOURCE GeneReport for Unigene cluster for RPS2P45 Gene:

Hs.661121
genes like me logo Genes that share expression patterns with RPS2P45: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P45 Gene

Orthologs for RPS2P45 Gene

Evolution for RPS2P45 Gene

ENSEMBL:
Gene Tree for RPS2P45 (if available)
TreeFam:
Gene Tree for RPS2P45 (if available)

No data available for Orthologs for RPS2P45 Gene

Paralogs for RPS2P45 Gene

No data available for Paralogs for RPS2P45 Gene

Variants for RPS2P45 Gene

Additional Variant Information for RPS2P45 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P45

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P45 Gene

Disorders for RPS2P45 Gene

Additional Disease Information for RPS2P45

No disorders were found for RPS2P45 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P45 Gene

Publications for RPS2P45 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations. (PMID: 18821565) Lasky-Su J … Faraone SV (American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 2008) 44 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for RPS2P45 Gene

Sources for RPS2P45 Gene

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