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Aliases for RPS2P42 Gene

Aliases for RPS2P42 Gene

  • Ribosomal Protein S2 Pseudogene 42 2 3
  • RPS2_19_1214 3
  • AC092183.1 5

External Ids for RPS2P42 Gene

Previous GeneCards Identifiers for RPS2P42 Gene

  • GC12U901065
  • GC12P015593

Summaries for RPS2P42 Gene

GeneCards Summary for RPS2P42 Gene

RPS2P42 (Ribosomal Protein S2 Pseudogene 42) is a Pseudogene.

Additional gene information for RPS2P42 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P42 Gene

Genomics for RPS2P42 Gene

Regulatory Elements for RPS2P42 Gene

Enhancers for RPS2P42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H015532 0.9 Ensembl ENCODE 0.2 +93.2 93161 0 CTCF ZNF654 TRIM22 FEZF1 NR3C1 RAD21 IKZF1 TARDBP ZNF580 NBN LOC105369672 RPS2P42
GH12H015446 0.4 ENCODE 0.4 +7.5 7518 0 FOS RPS2P42 LOC105369672
GH12H015527 0.7 Ensembl 0.2 +87.9 87897 0 SOX5 SOX13 CTCF FOXA2 NFIB FOXA3 RAD21 RFX5 FOXA1 ZNF217 LOC105369672 RPS2P42
GH12H015526 0.6 ENCODE 0.2 +86.7 86718 0 CTCF GATA3 NBN CEBPB CUX1 ATF7 MAFK LOC105369672 RPS2P42
GH12H015544 1.2 FANTOM5 Ensembl ENCODE 0.1 +107.3 107340 4 TRIM22 JUNB ELF1 DPF2 ZNF217 IKZF1 NBN MLLT1 ATF7 RUNX3 PTPRO LOC105369672 RPS2P42
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS2P42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P42 Gene

Chromosome:
12
Start:
15,439,504 bp from pter
End:
15,440,450 bp from pter
Size:
947 bases
Orientation:
Plus strand

Genomic View for RPS2P42 Gene

Genes around RPS2P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P42 Gene

Proteins for RPS2P42 Gene

Post-translational modifications for RPS2P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P42 Gene

Domains & Families for RPS2P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P42 Gene

Function for RPS2P42 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS2P42
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P42 Gene

Localization for RPS2P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P42 Gene

Pathways & Interactions for RPS2P42 Gene

SuperPathways for RPS2P42 Gene

No Data Available

Interacting Proteins for RPS2P42 Gene

Gene Ontology (GO) - Biological Process for RPS2P42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P42 Gene

Drugs & Compounds for RPS2P42 Gene

No Compound Related Data Available

Transcripts for RPS2P42 Gene

mRNA/cDNA for RPS2P42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS2P42
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P42 Gene

No ASD Table

Relevant External Links for RPS2P42 Gene

GeneLoc Exon Structure for
RPS2P42
ECgene alternative splicing isoforms for
RPS2P42

Expression for RPS2P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P42 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P42 Gene:

RPS2P42
genes like me logo Genes that share expression patterns with RPS2P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P42 Gene

Orthologs for RPS2P42 Gene

Evolution for RPS2P42 Gene

ENSEMBL:
Gene Tree for RPS2P42 (if available)
TreeFam:
Gene Tree for RPS2P42 (if available)

No data available for Orthologs for RPS2P42 Gene

Paralogs for RPS2P42 Gene

No data available for Paralogs for RPS2P42 Gene

Variants for RPS2P42 Gene

Relevant External Links for RPS2P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P42 Gene

Disorders for RPS2P42 Gene

No disorders were found for RPS2P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS2P42 Gene

Publications for RPS2P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPS2P42 Gene

Sources for RPS2P42 Gene

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