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Aliases for RPS2P38 Gene

Aliases for RPS2P38 Gene

  • Ribosomal Protein S2 Pseudogene 38 2 3
  • RPS2_18_1126 3
  • AC068472.1 5

External Ids for RPS2P38 Gene

Previous GeneCards Identifiers for RPS2P38 Gene

  • GC11P023480

Summaries for RPS2P38 Gene

GeneCards Summary for RPS2P38 Gene

RPS2P38 (Ribosomal Protein S2 Pseudogene 38) is a Pseudogene.

Additional gene information for RPS2P38 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P38 Gene

Genomics for RPS2P38 Gene

Regulatory Elements for RPS2P38 Gene

Enhancers for RPS2P38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H023539 0.8 Ensembl ENCODE 0.4 +19.9 19870 1 CTCF ZNF654 TRIM22 SMC3 ZNF143 RAD21 DEK RPS2P38 GC11M023700
GH11H023569 0.4 ENCODE 0.2 +49.4 49418 0 PKNOX1 IKZF2 RPS2P38 GC11M023700
GH11H023555 0.2 ENCODE 0.3 +36.0 36007 1 FANCF RPS2P38 GC11M023700
GH11H023480 0.2 ENCODE 0.3 -39.4 -39386 0 THAP12P4 RPS2P38
GH11H023490 0.2 ENCODE 0.3 -29.2 -29160 1 THAP12P4 RPS2P38
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS2P38 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P38 Gene

Chromosome:
11
Start:
23,520,295 bp from pter
End:
23,521,239 bp from pter
Size:
945 bases
Orientation:
Plus strand

Genomic View for RPS2P38 Gene

Genes around RPS2P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P38 Gene

Proteins for RPS2P38 Gene

Post-translational modifications for RPS2P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P38 Gene

Domains & Families for RPS2P38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P38 Gene

Function for RPS2P38 Gene

Phenotypes From GWAS Catalog for RPS2P38 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS2P38
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P38 Gene

Localization for RPS2P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P38 Gene

Pathways & Interactions for RPS2P38 Gene

SuperPathways for RPS2P38 Gene

No Data Available

Interacting Proteins for RPS2P38 Gene

Gene Ontology (GO) - Biological Process for RPS2P38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P38 Gene

Drugs & Compounds for RPS2P38 Gene

No Compound Related Data Available

Transcripts for RPS2P38 Gene

mRNA/cDNA for RPS2P38 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPS2P38
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P38 Gene

No ASD Table

Relevant External Links for RPS2P38 Gene

GeneLoc Exon Structure for
RPS2P38
ECgene alternative splicing isoforms for
RPS2P38

Expression for RPS2P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P38 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P38 Gene:

RPS2P38
genes like me logo Genes that share expression patterns with RPS2P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P38 Gene

Orthologs for RPS2P38 Gene

Evolution for RPS2P38 Gene

ENSEMBL:
Gene Tree for RPS2P38 (if available)
TreeFam:
Gene Tree for RPS2P38 (if available)

No data available for Orthologs for RPS2P38 Gene

Paralogs for RPS2P38 Gene

No data available for Paralogs for RPS2P38 Gene

Variants for RPS2P38 Gene

Relevant External Links for RPS2P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P38 Gene

Disorders for RPS2P38 Gene

Relevant External Links for RPS2P38

Genetic Association Database (GAD)
RPS2P38

No disorders were found for RPS2P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P38 Gene

Publications for RPS2P38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 45 60
  3. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 45 60

Products for RPS2P38 Gene

Sources for RPS2P38 Gene

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