RPS2P34 Gene
pseudogene GIFtS: 13
GCID: GC09P084746
|
|
Ribosomal Protein S2 Pseudogene 34
| |
Aliases
for RPS2P34 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
10fRNAdb,
12H-InvDB,
13NCBI,
14NONCODE,
and/or 15RNAdb)
About This Section
TryGeneCards Plus |
| Aliases |
|---|
| Ribosomal Protein S2 Pseudogene 341 2 | | RPS2_16_9902 |
Export aliases for RPS2P34 gene to outside databasesPrevious GC identifer: GC09P083937 |
Summaries
for RPS2P34 gene(According to Entrez Gene,
GeneCards,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
TryGeneCards Plus |
GeneCards Summary for RPS2P34 Gene:
RPS2P34 (ribosomal protein S2 pseudogene 34) is a pseudogene. Diseases associated with RPS2P34 include ulcerative colitis, and insulin resistance.
|
Genomic Views
for RPS2P34 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 75),
Regulatory elements and Epigenetics data according to
QIAGEN, and/or
SwitchGear Genomics)
About This Section
TryGeneCards Plus | Regulatory elements:
 Search for regulatory transcription factor binding sites for RPS2P34
Other transcription factors
Search Chromatin IP Primers for RPS2P34
Epigenetics:
| | DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat RPS2P34 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 9q21.32 Ensembl cytogenetic band: 9q21.32 HGNC cytogenetic band: 9q21.32RPS2P34 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 9 GeneLoc Exon Structure GeneLoc location for GC09P084746: view genomic region
(about GC identifiers)
Start:
|
84,745,649 bp from pter |
End:
|
84,746,581 bp from pter |
Size:
|
933 bases |
Orientation:
|
plus strand |
|
Proteins
for RPS2P34 gene
(According to
1UniProtKB,
HORDE,
2neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to PhosphoSitePlus,
Specific Peptides from DME,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Cloud-Clone Corp.,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Cloud-Clone Corp.,
Antibodies by
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
LSBio,
Abcam, and/or
Cloud-Clone Corp.)
About This Section
TryGeneCards Plus |
UniProtKB: --
|
Domains /
Families
for RPS2P34 gene(According to HGNC, IUPHAR, InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
TryGeneCards Plus | -- |
Function
for RPS2P34 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
genOway,
transcription factor targeting from QIAGEN
and/or HOMER,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
SwitchGear Genomics,
Gene Editing from DNA2.0,
Clones from OriGene,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
ESI BIO,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Apr 2014 via
Entrez Gene.)
About This Section
TryGeneCards Plus |
Animal Models:
Inhib. RNA
Products: |  | Browse OriGene RNAi
| | | Predesigned siRNA for gene silencing in human, mouse, rat RPS2P34 |
Cell Line
Products: |  | GenScript Custom overexpressing Cell Line Services for RPS2P34 | |  | Browse ESI BIO Cell Lines and PureStem Progenitors for RPS2P34  | In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RPS2P34 |
Localization
for RPS2P34 gene
(According to UniProtKB, COMPARTMENTS Subcellular localization database,
Ontologies according to Gene Ontology Consortium 01 Apr 2014 via
Entrez Gene.)
About This Section
TryGeneCards Plus | -- |
Pathways & Interactions
for RPS2P34 gene
(SuperPaths according to PathCards,
Pathways according to
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Sino Biological,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
QIAGEN,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2014 via
Entrez Gene).
About This Section
TryGeneCards Plus |
Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for RPS2P34
Interactions:
Search GeneGlobe Interaction Network for RPS2P34
|
Drugs & Compounds
for RPS2P34 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience,
ApexBio,
HMDB,
BitterDB, and/or
Novoseek,
Ligands according to IUPHAR,
and Drugs according to DrugBank,
Enzo Life Sciences, and/or
PharmGKB)
About This Section
TryGeneCards Plus |  Browse compounds at ApexBio
 Browse Tocris compounds for RPS2P34
|
Transcripts
for RPS2P34 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 236 Homo sapiens; Apr 25 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
Conferences by KenesGroup,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
SwitchGear Genomics,
Tagged/untagged cDNA clones from
OriGene,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene, and/or
QIAGEN
)
About This Section
TryGeneCards Plus |
1 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000445918
Inhib. RNA
Products: | | Browse OriGene RNAi
| |
| | Predesigned siRNA for gene silencing in human, mouse, rat RPS2P34 |
GeneLoc Exon Structure
|
Expression
for RPS2P34 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
Protein expression images according to data from SPIRE 1MOPED,
2PaxDb, and 3MaxQB,
plus additional links to
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
QIAGEN,
Primers from
OriGene, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
TryGeneCards Plus | RPS2P34 expression in normal human tissues
(normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS <intensity>2/3
CGAP TAG: --
About this image RPS2P34 Protein expression data from MOPED1, PaxDb2 and
MaxQB3:  --
Custom PCR Arrays for RPS2P34
Primer
Products: | | Browse OriGene qPCR
| | | Search Pre-validated RT2 qPCR
Primer Assays in human, mouse, rat RPS2P34 | | | QuantiTect SYBR Green Assays in human, mouse, rat RPS2P34 | | | QuantiFast Probe-based Assays in human, mouse, rat RPS2P34 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RPS2P34 |
Orthologs
for RPS2P34 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
TryGeneCards Plus |
--
ENSEMBL Gene Tree for RPS2P34 (if available)
TreeFam Gene Tree for RPS2P34 (if available) |
Paralogs
for RPS2P34 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
TryGeneCards Plus | -- |
Genomic Variants
for RPS2P34 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
4UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD), the Human Cytochrome P450 Allele
Nomenclature Database, and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
About This Section
TryGeneCards Plus | | | Site Specific Mutation Identification with PCR Assays |
|
Disorders
/ Diseases
for RPS2P34 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Conferences by KenesGroup,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
TryGeneCards Plus | 3  diseases for RPS2P34: About MalaCardsulcerative colitis insulin resistance parkinson's disease
RPS2P34 for disorders About GeneDecksing
Genetic Association Database (GAD): RPS2P34
Export disorders for RPS2P34 gene to outside databases
|
Publications
for RPS2P34 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
TryGeneCards Plus |
PubMed articles for RPS2P34 gene integrated from 10 sources:
(articles sorted by number of sources associating them with RPS2P34) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PubMed id 19123937)1, 3 Balasubramanian S....Gerstein M. (Genome Biol. 2009)
- Genome-wide detection of allele specific copy number variation associated with insulin resistance in African Americans from the HyperGEN study. (PubMed id 21901158)4 Irvin M.R....Arnett D.K. (PLoS ONE 2011)
- Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study. (PubMed id 19122664)4 Silverberg M.S....Duerr R.H. (Nat. Genet. 2009)
- A genome-wide genotyping study in patients with ischaemic stroke: initial analysis and data release. (PubMed id 17434096)4 MatarA-n M....Meschia J.F. (Lancet Neurol 2007)
- Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PubMed id 17052657)4 Fung H.C....Singleton A. (Lancet Neurol 2006)
|
External Searches for RPS2P34 gene (in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
TryGeneCards Plus |
|
Genome Databases showing RPS2P34 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
TryGeneCards Plus |
|
Other Databases showing RPS2P34 gene
(According to HUGE)
About This Section
TryGeneCards Plus | -- |
Specialized Databases showing RPS2P34 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
About This Section
TryGeneCards Plus |
|
About This Section
TryGeneCards Plus | Patent Information for RPS2P34 gene:
Search GeneIP for patents involving RPS2P34
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for RPS2P34 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, and ESI BIO, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or
ApexBio, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory,
genOway)
About This Section
TryGeneCards Plus |
 | |
 |
| | | | |
 |
 |
|  | Block miRNA regulation of human, mouse, rat RPS2P34 using miScript Target Protectors | | SeqTarget long-range PCR primers for resequencing RPS2P34 | | | DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat RPS2P34 | | Predesigned siRNA for gene silencing in human, mouse, rat RPS2P34 | | | QuantiFast Probe-based Assays in human, mouse, rat RPS2P34 | | QuantiTect SYBR Green Assays in human, mouse, rat RPS2P34 | | | Custom PCR Arrays for RPS2P34 | | Search Chromatin IP Primers for RPS2P34 | | | Search Pre-validated RT2 qPCR Primer Assays in human, mouse, rat RPS2P34 | | Search GeneGlobe Interaction Network for RPS2P34 | | | Search Regulatory tfbs for RPS2P34 |
| |
 |  |  |  | |
| | | Search Tocris compounds for RPS2P34 |
| | |  |  |  |
 | | | | |
 |
 |
 |  | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for RPS2P34 |
| |  |  |  |  | | | Search ThermoFisher Antibodies for RPS2P34 |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat RPS2P34 |
| | |  |  | | |
|
|
|
GeneCards Homepage -
Last full update: 7 May 2014 -
Incrementals: 9 May 2014 , 2 Jun 2014 , 26 Jun 2014 , 30 Jun 2014
View Random Gene
|
Category
|
|
|
|
| GIFtS Group |
|
Developed at the Crown Human Genome Center,
Department of Molecular Genetics,
the Weizmann Institute of Science
Copyright © 1996-2014
, Weizmann Institute of Science. All Rights Reserved.
Version: 3.12.136 22 July 2014
hostname: 356977-web1.xennexinc.com index build: 126 solr: 1.4
|
