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Aliases for RPS2P28 Gene

Aliases for RPS2P28 Gene

  • Ribosomal Protein S2 Pseudogene 28 2 3 5
  • RPS2_13_694 3

External Ids for RPS2P28 Gene

Previous GeneCards Identifiers for RPS2P28 Gene

  • GC06P043443
  • GC06P043333

Summaries for RPS2P28 Gene

GeneCards Summary for RPS2P28 Gene

RPS2P28 (Ribosomal Protein S2 Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P28 Gene

Genomics for RPS2P28 Gene

Regulatory Elements for RPS2P28 Gene

Enhancers for RPS2P28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F043302 0.8 ENCODE 16.3 -60.4 -60394 0.8 HDGF MLX ZFP64 ZNF133 ARID4B DMAP1 ZNF48 YY1 SP5 YY2 RPS2P28 ENSG00000223469 RPL29P16 CRIP3 SLC22A7
GH06F043266 1.4 FANTOM5 Ensembl ENCODE 16.3 -90.0 -89963 13.1 HDGF MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLH RPS2P29 RPS2P28 ENSG00000223469 RPL29P16 RRP36 KLC4 ENSG00000271754 DNPH1 LOC101929726
GH06F043624 0.7 ENCODE 16.2 +264.6 264624 7.4 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC MEF2D POLH RRP36 RPS2P29 LOC101929726 CUL7 SRF ENSG00000223469 RPS2P28 RPL29P16 CUL9
GH06F043667 0.9 FANTOM5 Ensembl ENCODE 16.2 +306.5 306491 5.8 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC POLH RPS2P29 ENSG00000223469 RPS2P28 RPL29P16 CUL9 RSPH9 MAD2L1BP GTPBP2 VEGFA
GH06F043634 0.2 ENCODE 16.2 +272.5 272542 2.1 ARNT CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 POLH RRP36 ENSG00000223469 RPS2P28 RPL29P16 RPS2P29 LOC101929726 CAPN11 PRPH2 RSPH9
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS2P28 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P28 Gene

Chromosome:
6
Start:
43,363,415 bp from pter
End:
43,364,219 bp from pter
Size:
805 bases
Orientation:
Plus strand

Genomic View for RPS2P28 Gene

Genes around RPS2P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P28 Gene

Proteins for RPS2P28 Gene

Post-translational modifications for RPS2P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P28 Gene

Domains & Families for RPS2P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P28 Gene

Function for RPS2P28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P28 Gene

Localization for RPS2P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS2P28 Gene

Pathways & Interactions for RPS2P28 Gene

SuperPathways for RPS2P28 Gene

No Data Available

Interacting Proteins for RPS2P28 Gene

Gene Ontology (GO) - Biological Process for RPS2P28 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P28 Gene

Transcripts for RPS2P28 Gene

mRNA/cDNA for RPS2P28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P28 Gene

No ASD Table

Relevant External Links for RPS2P28 Gene

GeneLoc Exon Structure for
RPS2P28
ECgene alternative splicing isoforms for
RPS2P28

Expression for RPS2P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS2P28 Gene

mRNA differential expression in normal tissues according to GTEx for RPS2P28 Gene

This gene is overexpressed in Testis (x6.7), Kidney - Cortex (x4.7), Spleen (x4.6), Minor Salivary Gland (x4.2), and Brain - Cerebellum (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPS2P28 Gene:

RPS2P28
genes like me logo Genes that share expression patterns with RPS2P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS2P28 Gene

Orthologs for RPS2P28 Gene

Evolution for RPS2P28 Gene

ENSEMBL:
Gene Tree for RPS2P28 (if available)
TreeFam:
Gene Tree for RPS2P28 (if available)

No data available for Orthologs for RPS2P28 Gene

Paralogs for RPS2P28 Gene

No data available for Paralogs for RPS2P28 Gene

Variants for RPS2P28 Gene

Relevant External Links for RPS2P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P28 Gene

Disorders for RPS2P28 Gene

No disorders were found for RPS2P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS2P28 Gene

Publications for RPS2P28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS2P28 Gene

Sources for RPS2P28 Gene

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