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Aliases for RPS2P19 Gene

Subcategory (RNA class) for RPS2P19 Gene

antisense

Aliases for RPS2P19 Gene

  • Ribosomal Protein S2 Pseudogene 19 2 3
  • RP11-441M10.1 5
  • RPS2_4_428 3

External Ids for RPS2P19 Gene

ORGUL Members for RPS2P19 Gene

Previous GeneCards Identifiers for RPS2P19 Gene

  • GC03U901221
  • GC03M159105

Summaries for RPS2P19 Gene

GeneCards Summary for RPS2P19 Gene

RPS2P19 (Ribosomal Protein S2 Pseudogene 19) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P19 Gene

Genomics for RPS2P19 Gene

Regulatory Elements for RPS2P19 Gene

Enhancers for RPS2P19 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F159418 0.8 ENCODE 0.3 -31.3 -31303 1.4 ESRRA FOS LXN RPS2P19 LOC100420738
GH03F159457 0.9 Ensembl ENCODE 0.2 -71.0 -70983 1.6 CTCF JUND ZNF366 PRDM10 CEBPG FOS RAD21 RPS2P19 LOC100420738
GH03F159465 0.3 FANTOM5 0.2 -78.2 -78227 0.1 SCHIP1 IQCJ RPS2P19 LOC100420738
GH03F159619 0.8 Ensembl 0.1 -232.1 -232061 0.2 PKNOX1 ZNF223 FEZF1 ZIC2 ZNF2 KLF7 TCF7L2 GFI1B OVOL3 ZBTB8A LOC100420738 RPS2P19
GH03F159620 0.7 ENCODE 0.1 -233.6 -233597 0.2 STAT1 JUN CEBPB SIN3A EP300 RFX5 JUND STAT3 RCOR1 FOS LOC100420738 RPS2P19
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPS2P19 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P19 Gene

Chromosome:
3
Start:
159,386,756 bp from pter
End:
159,387,440 bp from pter
Size:
685 bases
Orientation:
Minus strand

Genomic View for RPS2P19 Gene

Genes around RPS2P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P19 Gene

Proteins for RPS2P19 Gene

Post-translational modifications for RPS2P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P19 Gene

Domains & Families for RPS2P19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P19 Gene

Function for RPS2P19 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P19 Gene

Localization for RPS2P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS2P19 Gene

Pathways & Interactions for RPS2P19 Gene

SuperPathways for RPS2P19 Gene

No Data Available

Interacting Proteins for RPS2P19 Gene

Gene Ontology (GO) - Biological Process for RPS2P19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P19 Gene

Transcripts for RPS2P19 Gene

mRNA/cDNA for RPS2P19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P19 Gene

No ASD Table

Relevant External Links for RPS2P19 Gene

GeneLoc Exon Structure for
RPS2P19
ECgene alternative splicing isoforms for
RPS2P19

Expression for RPS2P19 Gene

mRNA expression in normal human tissues for RPS2P19 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P19 Gene:

RPS2P19
genes like me logo Genes that share expression patterns with RPS2P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS2P19 Gene

Orthologs for RPS2P19 Gene

Evolution for RPS2P19 Gene

ENSEMBL:
Gene Tree for RPS2P19 (if available)
TreeFam:
Gene Tree for RPS2P19 (if available)

No data available for Orthologs for RPS2P19 Gene

Paralogs for RPS2P19 Gene

No data available for Paralogs for RPS2P19 Gene

Variants for RPS2P19 Gene

Relevant External Links for RPS2P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P19 Gene

Disorders for RPS2P19 Gene

Relevant External Links for RPS2P19

Genetic Association Database (GAD)
RPS2P19

No disorders were found for RPS2P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P19 Gene

Publications for RPS2P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Multiple common variants for celiac disease influencing immune gene expression. (PMID: 20190752) Dubois P.C. … van Heel D.A. (Nat. Genet. 2010) 46 64
  3. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with BehAset's disease. (PMID: 20622878) Remmers E.F. … GA1l A. (Nat. Genet. 2010) 46 64
  4. Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci. (PMID: 19525953) De Jager P.L. … Oksenberg J.R. (Nat. Genet. 2009) 46 64
  5. Newly identified genetic risk variants for celiac disease related to the immune response. (PMID: 18311140) Hunt K.A. … van Heel D.A. (Nat. Genet. 2008) 46 64

Products for RPS2P19 Gene

Sources for RPS2P19 Gene

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