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Aliases for RPS2P17 Gene

Aliases for RPS2P17 Gene

  • Ribosomal Protein S2 Pseudogene 17 2 3
  • RPS2_6_247 3
  • AC022210.2 5

External Ids for RPS2P17 Gene

Previous GeneCards Identifiers for RPS2P17 Gene

  • GC02P084998
  • GC02P085143

Summaries for RPS2P17 Gene

GeneCards Summary for RPS2P17 Gene

RPS2P17 (Ribosomal Protein S2 Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P17 Gene

Genomics for RPS2P17 Gene

Regulatory Elements for RPS2P17 Gene

Enhancers for RPS2P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F084956 1.6 FANTOM5 Ensembl ENCODE 11.2 +43.1 43115 4.7 SIN3A FEZF1 GTF3C2 SLC30A9 GLIS2 FOS DEK ZNF263 SP3 REST C2orf68 LOC100996506 RPS2P17 TRABD2A GC02M084965 GC02M084928
GH02F084887 1.4 FANTOM5 Ensembl ENCODE 12.1 -26.7 -26683 3.2 PKNOX1 CREB3L1 YBX1 RAD21 YY1 ETV6 CEBPB JUNB CEBPA IKZF1 RPS2P17 TRABD2A TMSB10 LOC105374837 ENSG00000279992
GH02F085275 1.7 VISTA FANTOM5 Ensembl ENCODE 9.7 +361.7 361737 3.7 CBX3 SREBF2 SIN3A RAD21 SCRT2 FOS DEK SP5 ZBTB11 REST TCF7L1 RNU6-674P RPS2P17 TRABD2A SH2D6 LOC100996506 ATOH8 TMEM150A TMSB10 GC02M085296
GH02F085011 1.5 FANTOM5 Ensembl ENCODE 10.7 +99.7 99671 8.9 PKNOX1 ATF1 ZFP64 ZNF2 RAD21 ZNF121 SCRT2 ZNF391 CREM EGR2 C2orf68 KCMF1 RPS2P17 TRABD2A LOC100996506 MAT2A GC02P085016 GC02M085007 PIR52578
GH02F084963 1.3 Ensembl ENCODE 10.8 +48.7 48728 2.3 ATF1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 FOS PAF1 SP5 RPS2P17 TRABD2A KCMF1 GC02M084965 GC02M084928
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS2P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P17 Gene

Chromosome:
2
Start:
84,915,763 bp from pter
End:
84,916,711 bp from pter
Size:
949 bases
Orientation:
Plus strand

Genomic View for RPS2P17 Gene

Genes around RPS2P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P17 Gene

Proteins for RPS2P17 Gene

Post-translational modifications for RPS2P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P17 Gene

Domains & Families for RPS2P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P17 Gene

Function for RPS2P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P17 Gene

Localization for RPS2P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS2P17 Gene

Pathways & Interactions for RPS2P17 Gene

SuperPathways for RPS2P17 Gene

No Data Available

Interacting Proteins for RPS2P17 Gene

Gene Ontology (GO) - Biological Process for RPS2P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P17 Gene

Transcripts for RPS2P17 Gene

mRNA/cDNA for RPS2P17 Gene

(19) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P17 Gene

No ASD Table

Relevant External Links for RPS2P17 Gene

GeneLoc Exon Structure for
RPS2P17
ECgene alternative splicing isoforms for
RPS2P17

Expression for RPS2P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS2P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P17 Gene:

RPS2P17
genes like me logo Genes that share expression patterns with RPS2P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPS2P17 Gene

Orthologs for RPS2P17 Gene

Evolution for RPS2P17 Gene

ENSEMBL:
Gene Tree for RPS2P17 (if available)
TreeFam:
Gene Tree for RPS2P17 (if available)

No data available for Orthologs for RPS2P17 Gene

Paralogs for RPS2P17 Gene

No data available for Paralogs for RPS2P17 Gene

Variants for RPS2P17 Gene

Relevant External Links for RPS2P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P17 Gene

Disorders for RPS2P17 Gene

No disorders were found for RPS2P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS2P17 Gene

Publications for RPS2P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPS2P17 Gene

Sources for RPS2P17 Gene

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