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Aliases for RPS2P14 Gene

Subcategory (RNA class) for RPS2P14 Gene

lncRNA

Aliases for RPS2P14 Gene

  • Ribosomal Protein S2 Pseudogene 14 2 3
  • RP4-730K3.3 5
  • RPS2_2_88 3

External Ids for RPS2P14 Gene

ORGUL Members for RPS2P14 Gene

Previous GeneCards Identifiers for RPS2P14 Gene

  • GC01U902348
  • GC01M114242

Summaries for RPS2P14 Gene

GeneCards Summary for RPS2P14 Gene

RPS2P14 (Ribosomal Protein S2 Pseudogene 14) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P14 Gene

Genomics for RPS2P14 Gene

Regulatory Elements for RPS2P14 Gene

Enhancers for RPS2P14 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G113683 0.8 Ensembl ENCODE 0.4 +15.7 15677 1.7 FOXK2 GATA2 ETV1 SCRT2 MNT MAFK RPS2P14 GC01M113547
GH01G113757 1.4 ENCODE dbSUPER 0.2 -59.4 -59438 3.6 HDGF PKNOX1 CREB3L1 ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 PHTF1 AP4B1 AP4B1-AS1 RPS2P14
GH01G113659 0.9 ENCODE 0.3 +40.2 40167 0.7 HDAC1 ATF1 CHAMP1 ZNF766 GATA2 CREM CAVIN1 ZBTB11 USF2 ZEB2 MAGI3 RPS2P14 GC01M113547
GH01G113662 0.7 ENCODE 0.3 +36.2 36203 1.0 SIX4 TAL1 ZNF140 MAFG GATAD2B PAX8 ZEB2 ZBTB40 ARID1B TCF12 RPS2P14 GC01M113547
GH01G113693 0.5 FANTOM5 0.4 +5.7 5666 0.3 ZNF692 MAGI3 RPS2P14 GC01M113547
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPS2P14 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPS2P14 Gene

Chromosome:
1
Start:
113,698,884 bp from pter
End:
113,699,631 bp from pter
Size:
748 bases
Orientation:
Minus strand

Genomic View for RPS2P14 Gene

Genes around RPS2P14 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P14 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P14 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P14 Gene

Proteins for RPS2P14 Gene

Post-translational modifications for RPS2P14 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P14 Gene

Domains & Families for RPS2P14 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P14 Gene

Function for RPS2P14 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P14 Gene

Localization for RPS2P14 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPS2P14 Gene

Pathways & Interactions for RPS2P14 Gene

SuperPathways for RPS2P14 Gene

No Data Available

Interacting Proteins for RPS2P14 Gene

Gene Ontology (GO) - Biological Process for RPS2P14 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P14 Gene

Transcripts for RPS2P14 Gene

mRNA/cDNA for RPS2P14 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P14 Gene

No ASD Table

Relevant External Links for RPS2P14 Gene

GeneLoc Exon Structure for
RPS2P14
ECgene alternative splicing isoforms for
RPS2P14

Expression for RPS2P14 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P14 Gene

mRNA differential expression in normal tissues according to GTEx for RPS2P14 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.7), Whole Blood (x5.0), and Brain - Cerebellum (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS2P14 Gene:

RPS2P14
genes like me logo Genes that share expression patterns with RPS2P14: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P14 Gene

Orthologs for RPS2P14 Gene

Evolution for RPS2P14 Gene

ENSEMBL:
Gene Tree for RPS2P14 (if available)
TreeFam:
Gene Tree for RPS2P14 (if available)

No data available for Orthologs for RPS2P14 Gene

Paralogs for RPS2P14 Gene

No data available for Paralogs for RPS2P14 Gene

Variants for RPS2P14 Gene

Relevant External Links for RPS2P14 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P14

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P14 Gene

Disorders for RPS2P14 Gene

Relevant External Links for RPS2P14

Genetic Association Database (GAD)
RPS2P14

No disorders were found for RPS2P14 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P14 Gene

Publications for RPS2P14 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N. … Do C.B. (PLoS ONE 2012) 46 64
  3. Common variants at CD40 and other loci confer risk of rheumatoid arthritis. (PMID: 18794853) Raychaudhuri S. … Plenge R.M. (Nat. Genet. 2008) 46 64
  4. Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. (PMID: 18978792) Cooper J.D. … Todd J.A. (Nat. Genet. 2008) 46 64
  5. Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes. (PMID: 17554260) Todd J.A. … Clayton D.G. (Nat. Genet. 2007) 46 64

Products for RPS2P14 Gene

Sources for RPS2P14 Gene

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